Gene : Aqcoe1G212100 A. coerulea v3.1

Defline:  (1 of 3) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  2121
Name:  ? Aqcoe1G212100 Secondary Identifier:  ? PAC:33078126

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Acoerulea GLYOXYLATE-BYPASS Aquilegia coerulea pathologic  
Acoerulea PWY-5464 Aquilegia coerulea pathologic  
Acoerulea PWY-561 Aquilegia coerulea pathologic  
Acoerulea PWY-5690 Aquilegia coerulea pathologic  
Acoerulea PWY-6549 Aquilegia coerulea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Aqcoe1G212100 0.5kb upstream 0.5kb upstream 7587 true Chr_01: 12673389-12680975 Aquilegia coerulea
Aqcoe1G212100 0.5kb upstream 0.5kb upstream 500 false Chr_01: 12673389-12673888 Aquilegia coerulea
Aqcoe1G212100 0.5kb downstream 0.5kb downstream 7587 true Chr_01: 12673889-12681475 Aquilegia coerulea
Aqcoe1G212100 0.5kb downstream 0.5kb downstream 500 false Chr_01: 12680976-12681475 Aquilegia coerulea
Aqcoe1G212100 1.0kb upstream 1.0kb upstream 8087 true Chr_01: 12672889-12680975 Aquilegia coerulea
Aqcoe1G212100 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 12672889-12673888 Aquilegia coerulea
Aqcoe1G212100 1.0kb downstream 1.0kb downstream 8087 true Chr_01: 12673889-12681975 Aquilegia coerulea
Aqcoe1G212100 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 12680976-12681975 Aquilegia coerulea
Aqcoe1G212100 2.0kb upstream 2.0kb upstream 9087 true Chr_01: 12671889-12680975 Aquilegia coerulea
Aqcoe1G212100 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 12671889-12673888 Aquilegia coerulea
Aqcoe1G212100 2.0kb downstream 2.0kb downstream 9087 true Chr_01: 12673889-12682975 Aquilegia coerulea
Aqcoe1G212100 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 12680976-12682975 Aquilegia coerulea
Aqcoe1G212100 5.0kb upstream 5.0kb upstream 12087 true Chr_01: 12668889-12680975 Aquilegia coerulea
Aqcoe1G212100 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 12668889-12673888 Aquilegia coerulea
Aqcoe1G212100 5.0kb downstream 5.0kb downstream 12087 true Chr_01: 12673889-12685975 Aquilegia coerulea
Aqcoe1G212100 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 12680976-12685975 Aquilegia coerulea
Aqcoe1G212100 10.0kb upstream 10.0kb upstream 17087 true Chr_01: 12663889-12680975 Aquilegia coerulea
Aqcoe1G212100 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 12663889-12673888 Aquilegia coerulea
Aqcoe1G212100 10.0kb downstream 10.0kb downstream 17087 true Chr_01: 12673889-12690975 Aquilegia coerulea
Aqcoe1G212100 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 12680976-12690975 Aquilegia coerulea

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain