Protein Domain : IPR005034

Type:  Domain Name:  Dicer dimerisation domain
Description:  This domain is found in members of the Dicer protein family which function in RNA interference, an evolutionarily conserved mechanism for gene silencing using double-stranded RNA (dsRNA) molecules. It is essential for the activity of Dicer [, ]. It is a divergent double stranded RNA-binding domain []. The N-terminal alpha helix of this domain is in a different orientation to that found in canonical dsRNA-binding domains. This results in a change of charge distribution at the potential dsRNA-binding surface and in the N- and C-termini of the domain being in close proximity []. This domain has weak dsRNA-binding activity. It mediates heterodimerisation of Dicer proteins with their respective protein partners []. Short Name:  Dicer_dimerisation_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF03368
PS51327

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0016891 IPR005034

1 Ontology Annotations

GO Term Gene Name
GO:0016891 IPR005034

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
444049 D8S6V8 PAC:15413649 Selaginella moellendorffii 1686  
407400 D8R5H3 PAC:15418892 Selaginella moellendorffii 497  
86110 D8R6I9 PAC:15420555 Selaginella moellendorffii 1730  
448444 D8T7D0 PAC:15405962 Selaginella moellendorffii 1719  
74321 D8QNJ9 PAC:15409014 Selaginella moellendorffii 1291  
evm.TU.contig_36105.1 PAC:16430774 Carica papaya 421  
evm.model.supercontig_123.45 PAC:16407145 Carica papaya 752  
evm.model.supercontig_57.74 PAC:16422899 Carica papaya 1368  
evm.model.supercontig_67.84 PAC:16424770 Carica papaya 689  
29737.m001250 B9SC13 PAC:16807268 Ricinus communis 1633  
29739.m003642 B9RQZ1 PAC:16807422 Ricinus communis 1660  
29929.m004545 B9RM41 PAC:16813785 Ricinus communis 1388  
30076.m004468 B9RMV8 PAC:16817081 Ricinus communis 1543  
Cucsa.055950.1 PAC:16954474 Cucumis sativus 1250  
Cucsa.356600.2 PAC:16980321 Cucumis sativus 1392  
Cucsa.356600.3 PAC:16980322 Cucumis sativus 1392  
Cucsa.356600.4 PAC:16980323 Cucumis sativus 1387  
Cucsa.356600.1 PAC:16980320 Cucumis sativus 1392  
Cucsa.260100.1 A0A0A0L3I6 PAC:16973119 Cucumis sativus 1989  
Cucsa.350750.2 PAC:16979902 Cucumis sativus 1195  
Cucsa.350750.1 PAC:16979901 Cucumis sativus 1348  
orange1.1g000384m PAC:18126111 Citrus sinensis 1590  
orange1.1g000379m PAC:18126110 Citrus sinensis 1604  
orange1.1g000380m PAC:18122081 Citrus sinensis 1601  
orange1.1g000607m A0A067DVW3 PAC:18138401 Citrus sinensis 1396  
orange1.1g003062m PAC:18138399 Citrus sinensis 852  
orange1.1g000174m A0A067HF90 PAC:18137252 Citrus sinensis 1931  
AT5G20320.1 P84634 PAC:19672592 Arabidopsis thaliana 1702  
AT5G20320.2 F4K482 PAC:19672593 Arabidopsis thaliana 1688  
AT3G03300.3 Q3EBC8 PAC:19662086 Arabidopsis thaliana 1388  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            16954143
            17666393
            20106953
            16424907