Protein Domain : IPR013822

Type:  Domain Name:  Signal recognition particle, SRP54 subunit, helical bundle
Description:  This entry represents the N-terminal helical bundle domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species.Other proteins with this domain include signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures (in conjunction with SRP) the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; and bacterial FtsY protein, which is believed to play a similar role to that played by the eukaryotic docking protein. Short Name:  Signal_recog_particl_SRP54_hlx

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF02881
SM00963
SSF47364

3 Found Ins

DB identifier Type Name
IPR004780 Family Signal recognition particle protein Ffh
IPR006325 Family Signal recognition particle, SRP54 subunit, eukaryotic
IPR004390 Family Signal-recognition particle receptor FtsY

2 GO Annotations

GO Term Gene Name
GO:0005525 IPR013822
GO:0006614 IPR013822

2 Ontology Annotations

GO Term Gene Name
GO:0005525 IPR013822
GO:0006614 IPR013822

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
81201 D8R0L2 PAC:15406612 Selaginella moellendorffii 221  
81276 D8QZ73 PAC:15406766 Selaginella moellendorffii 494  
82182 D8R0L6 PAC:15408976 Selaginella moellendorffii 467  
158663 D8SVD6 PAC:15416545 Selaginella moellendorffii 491  
75660 D8QR53 PAC:15414437 Selaginella moellendorffii 633  
77470 D8QS00 PAC:15418713 Selaginella moellendorffii 333  
evm.model.supercontig_167.7 PAC:16410495 Carica papaya 495  
evm.model.supercontig_18.211 PAC:16411362 Carica papaya 366  
evm.model.supercontig_305.5 PAC:16417093 Carica papaya 104  
evm.model.supercontig_3165.2 PAC:16417294 Carica papaya 79  
evm.model.supercontig_46.162 PAC:16420447 Carica papaya 615  
evm.model.supercontig_5.5 PAC:16421499 Carica papaya 477  
29841.m002885 B9RV94 PAC:16810598 Ricinus communis 497  
29912.m005321 B9RK62 PAC:16813199 Ricinus communis 206  
30174.m008977 B9RDL9 PAC:16822619 Ricinus communis 362  
57811.m000013 B9TNW0 PAC:16829080 Ricinus communis 259  
28629.m000555 B9SWF9 PAC:16801310 Ricinus communis 572  
29687.m000580 B9STS5 PAC:16805834 Ricinus communis 618  
Cucsa.083420.1 A0A0A0KIP4 PAC:16956426 Cucumis sativus 572  
Cucsa.096020.1 A0A0A0KYL0 PAC:16957973 Cucumis sativus 495  
Cucsa.090150.1 PAC:16957255 Cucumis sativus 617  
Cucsa.258140.1 PAC:16972813 Cucumis sativus 430  
orange1.1g012680m PAC:18117890 Citrus sinensis 458  
orange1.1g011624m PAC:18117889 Citrus sinensis 481  
orange1.1g008282m PAC:18117888 Citrus sinensis 571  
orange1.1g013364m A0A067F7L3 PAC:18121974 Citrus sinensis 444  
orange1.1g008816m A0A067F8F7 PAC:18121973 Citrus sinensis 552  
orange1.1g007033m A0A067EWE5 PAC:18121968 Citrus sinensis 621  
orange1.1g007024m A0A067EWE5 PAC:18121970 Citrus sinensis 621  
orange1.1g007005m A0A067EWE5 PAC:18121969 Citrus sinensis 621  

0 Publications