Protein Domain : IPR005576

Type:  Domain Name:  RNA polymerase Rpb7, N-terminal
Description:  The eukaryotic RNA polymerase subunits RPB4 and RPB7 form a heterodimer that reversibly associates with the RNA polymerase II core. Archaeal cells contain a single RNAP made up of about 12 subunits, displaying considerable homology to the eukaryotic RNAPII subunits. The RPB4 and RPB7 homologues are called subunits F and E, respectively, and have been shown to form a stable heterodimer. While the RPB7 homologue is reasonably well conserved, the similarity between the eukaryotic RPB4 and the archaeal F subunit is barely detectable [].This entry represents the N-terminal, heterodimerisation domain of RPB7. Short Name:  RNA_pol_Rpb7_N

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF03876
G3DSA:3.30.1490.120
SSF88798

1 Found In

DB identifier Type Name
IPR004519 Family DNA-directed RNA polymerase, subunit E/RPC8

2 GO Annotations

GO Term Gene Name
GO:0003899 IPR005576
GO:0006351 IPR005576

2 Ontology Annotations

GO Term Gene Name
GO:0003899 IPR005576
GO:0006351 IPR005576

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
98932 D8RQL4 PAC:15417434 Selaginella moellendorffii 175  
235152 D8SUG5 PAC:15403748 Selaginella moellendorffii 155  
75793 D8QQ74 PAC:15415255 Selaginella moellendorffii 177  
128885 D8SZY2 PAC:15418948 Selaginella moellendorffii 187  
evm.model.supercontig_2.369 PAC:16412751 Carica papaya 176  
evm.model.supercontig_52.135 PAC:16421993 Carica papaya 215  
evm.model.supercontig_81.63 PAC:16426980 Carica papaya 174  
29751.m001862 B9S3C9 PAC:16807868 Ricinus communis 176  
29838.m001644 B9S9D8 PAC:16810314 Ricinus communis 176  
29883.m002000 B9S4T0 PAC:16812087 Ricinus communis 194  
Cucsa.383860.1 A0A0A0LKQ1 PAC:16982447 Cucumis sativus 175  
Cucsa.383860.2 A0A0A0LKQ1 PAC:16982448 Cucumis sativus 175  
Cucsa.067640.1 A0A0A0KPS4 PAC:16955362 Cucumis sativus 176  
Cucsa.067640.3 A0A0A0KPS4 PAC:16955364 Cucumis sativus 176  
Cucsa.067640.4 A0A0A0KPS4 PAC:16955365 Cucumis sativus 176  
Cucsa.067640.5 PAC:16955366 Cucumis sativus 173  
Cucsa.067640.2 A0A0A0KPS4 PAC:16955363 Cucumis sativus 176  
Cucsa.204830.1 PAC:16969015 Cucumis sativus 216  
Cucsa.204830.2 PAC:16969016 Cucumis sativus 216  
Cucsa.254900.2 A0A0A0L5A3 PAC:16972317 Cucumis sativus 190  
Cucsa.254900.1 A0A0A0L5A3 PAC:16972316 Cucumis sativus 190  
orange1.1g047634m A0A067DEB5 PAC:18104771 Citrus sinensis 82  
orange1.1g029485m A0A067FM94 PAC:18093168 Citrus sinensis 192  
orange1.1g030458m A0A067FQT5 PAC:18093170 Citrus sinensis 177  
orange1.1g030455m A0A067FQT5 PAC:18093169 Citrus sinensis 177  
orange1.1g032987m A0A067FYJ9 PAC:18093171 Citrus sinensis 129  
orange1.1g029495m A0A067FM94 PAC:18093167 Citrus sinensis 192  
orange1.1g048593m A0A067DSR7 PAC:18108852 Citrus sinensis 150  
orange1.1g042741m A0A067E3P3 PAC:18108841 Citrus sinensis 166  
orange1.1g034902m A0A067E4P0 PAC:18108840 Citrus sinensis 79  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11741548