Protein Domain : IPR022967

Type:  Domain Name:  RNA-binding domain, S1
Description:  The S1 domain was originally identified in ribosomal protein S1 but is found in a large number of RNA-associated proteins. The structure of the S1 RNA-binding domain from the Escherichia colipolynucleotide phosphorylase has been determined using NMR methods and consists of a five-stranded antiparallel beta barrel. Conserved residues on one face of the barrel and adjacent loops form the putative RNA-binding site []. The structure of the S1 domain is very similar to that of cold shock proteins. This suggests that they may both be derived from an ancient nucleic acid-binding protein []. Short Name:  S1_dom

2 Child Features

DB identifier Type Name
IPR003029 Domain S1 domain
IPR006196 Domain RNA-binding domain, S1, IF1 type

0 Contains

1 Cross References

Identifier
SM00316

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
431207 D8TBV5 PAC:15421282 Selaginella moellendorffii 417  
412223 D8RKH1 PAC:15409962 Selaginella moellendorffii 382  
412227 D8RKH5 PAC:15409973 Selaginella moellendorffii 429  
412245 D8RKJ0 PAC:15410025 Selaginella moellendorffii 393  
412242 D8RKI8 PAC:15410021 Selaginella moellendorffii 606  
412236 D8RKI2 PAC:15410000 Selaginella moellendorffii 479  
412232 D8RKI0 PAC:15409996 Selaginella moellendorffii 425  
412239 D8RKI5 PAC:15410003 Selaginella moellendorffii 883  
431822 D8TDX5 PAC:15403594 Selaginella moellendorffii 433  
431837 D8TDY7 PAC:15403635 Selaginella moellendorffii 429  
96268 D8RLV4 PAC:15406263 Selaginella moellendorffii 297  
271018 D8RQA0 PAC:15420104 Selaginella moellendorffii 434  
267638 D8RQC6 PAC:15412779 Selaginella moellendorffii 337  
415410 D8RW17 PAC:15420221 Selaginella moellendorffii 366  
415455 D8RW59 PAC:15420331 Selaginella moellendorffii 312  
415445 D8RW51 PAC:15420311 Selaginella moellendorffii 180  
79973 D8QXU2 PAC:15405996 Selaginella moellendorffii 82  
419585 D8S9E8 PAC:15410586 Selaginella moellendorffii 309  
420490 D8SC57 PAC:15413045 Selaginella moellendorffii 452  
6138 D8R3Q7 PAC:15419347 Selaginella moellendorffii 169  
60716 D8QTN3 PAC:15415584 Selaginella moellendorffii 877  
evm.TU.contig_30743.1 PAC:16429877 Carica papaya 359  
evm.model.supercontig_1.187 PAC:16404107 Carica papaya 342  
evm.model.supercontig_14.106 PAC:16408599 Carica papaya 556  
evm.model.supercontig_146.69 PAC:16409161 Carica papaya 412  
evm.model.supercontig_1617.1 PAC:16410227 Carica papaya 1414  
evm.model.supercontig_26.112 PAC:16415042 Carica papaya 500  
evm.model.supercontig_26.22 PAC:16415161 Carica papaya 1420  
evm.model.supercontig_321.5 PAC:16417496 Carica papaya 148  
evm.model.supercontig_76.19 PAC:16425985 Carica papaya 175  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9008164