Protein Domain : IPR004401

Type:  Family Name:  Nucleoid-associated protein YbaB family
Description:  This is a family of DNA-binding proteins. It is restricted to bacteria and plants. Members of this family form homodimers which bind DNA via a tweezer-like structure [, , ]. The conformation of the DNA is changed when bound to these proteins []. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage []. The plant form contains an additional N-terminal region that may serve as a transit peptide and shows a close relationship to the cyanobacterial member, suggesting that it is a chloroplast protein.The crystal structure YbaB from Haemophilus influenzaerevealed a core structure consisting of two layers, alpha/beta; YbaB forms a tight dimer with a 3-layer structure, beta/alpha/beta []. Short Name:  YbaB

0 Child Features

0 Contains

6 Cross Referencess

Identifier
PF02575
PIRSF004555
TIGR00103
G3DSA:3.30.1310.10
SSF82607
MF_00274

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
406722 D8R189 PAC:15418290 Selaginella moellendorffii 355  
76950 D8QSN0 PAC:15419553 Selaginella moellendorffii 111  
evm.model.supercontig_46.167 PAC:16420452 Carica papaya 186  
29848.m004532 B9RNV1 PAC:16811188 Ricinus communis 196  
29270.m000055 B9TBG6 PAC:16802591 Ricinus communis 409  
29687.m000589 B9STT4 PAC:16805843 Ricinus communis 195  
Cucsa.093440.1 A0A0A0LWF8 PAC:16957620 Cucumis sativus 187  
Cucsa.158400.1 PAC:16965116 Cucumis sativus 254  
Cucsa.158400.2 PAC:16965117 Cucumis sativus 254  
orange1.1g029494m A0A067F7L8 PAC:18122082 Citrus sinensis 192  
orange1.1g033102m A0A067EWF3 PAC:18122084 Citrus sinensis 127  
orange1.1g031557m A0A067EWL2 PAC:18122083 Citrus sinensis 157  
AT4G30620.1 Q9M098 PAC:19645506 Arabidopsis thaliana 180  
AT3G23050.2 F4J2U7 PAC:19664619 Arabidopsis thaliana 210  
AT1G48360.3 Q5XVJ4 PAC:19651905 Arabidopsis thaliana 513  
AT1G48360.1 Q5XVJ4 PAC:19651904 Arabidopsis thaliana 746  
AT2G24020.1 O82230 PAC:19639773 Arabidopsis thaliana 182  
AT2G24020.2 O82230 PAC:19639774 Arabidopsis thaliana 180  
Thhalv10026346m V4MFV6 PAC:20195982 Eutrema salsugineum 183  
Thhalv10000373m V4NJ85 PAC:20208366 Eutrema salsugineum 129  
Thhalv10000343m V4L7K6 PAC:20208365 Eutrema salsugineum 178  
Ciclev10010245m V4WF62 PAC:20794056 Citrus clementina 144  
Ciclev10009008m V4UKS2 PAC:20794992 Citrus clementina 306  
Ciclev10009489m V4WJA1 PAC:20792652 Citrus clementina 208  
Ciclev10008984m V4U1Q2 PAC:20794990 Citrus clementina 312  
Ciclev10033956m V4VB10 PAC:20803370 Citrus clementina 186  
Lus10015490 PAC:23173683 Linum usitatissimum 122  
Lus10011007 PAC:23148630 Linum usitatissimum 239  
Potri.011G149300.3 A0A2K1YKJ4 PAC:27001414 Populus trichocarpa 672  
Potri.011G149300.4 PAC:27001416 Populus trichocarpa 609  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12486730
            19594923
            19208644