Protein Domain : IPR005717

Type:  Family Name:  Ribosomal protein S7, bacterial/organellar-type
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].This entry represents the bacterial and organellar branch of the ribosomal protein S7 family. Short Name:  Ribosomal_S7_bac/org-type

0 Child Features

1 Contains

DB identifier Type Name
IPR020606 Conserved_site Ribosomal protein S7, conserved site

2 Cross Referencess

Identifier
TIGR01029
MF_00480_B

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0003735 IPR005717
GO:0006412 IPR005717
GO:0015935 IPR005717

3 Ontology Annotations

GO Term Gene Name
GO:0003735 IPR005717
GO:0006412 IPR005717
GO:0015935 IPR005717

1 Parent Features

DB identifier Type Name
IPR000235 Family Ribosomal protein S5/S7

743 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
137860 D8TE65 PAC:15422996 Selaginella moellendorffii 156  
77094 D8QSP0 PAC:15415734 Selaginella moellendorffii 158  
evm.model.supercontig_263.27 PAC:16415391 Carica papaya 172  
30185.m000921 B9S1A9 PAC:16823025 Ricinus communis 109  
Cucsa.173630.1 PAC:16966640 Cucumis sativus 149  
Cucsa.245470.1 PAC:16971357 Cucumis sativus 148  
ATCG00900.1 P61841 PAC:19637992 Arabidopsis thaliana 155  
ATMG01270.1 P92557 PAC:19643610 Arabidopsis thaliana 148  
ATCG01240.1 P61841 PAC:19638017 Arabidopsis thaliana 155  
AT2G07696.1 P92557 PAC:19639586 Arabidopsis thaliana 148  
Thhalv10011843m V4JZ76 PAC:20185216 Eutrema salsugineum 155  
Lus10027894 PAC:23156997 Linum usitatissimum 233  
Lus10002394 PAC:23170821 Linum usitatissimum 217  
Potri.004G140500.1 U5GIT3 PAC:26991998 Populus trichocarpa 216  
Potri.013G138900.1 A4GYV8 PAC:26994892 Populus trichocarpa 155  
Gorai.013G212500.1 PAC:26791478 Gossypium raimondii 153  
Thecc1EG046408t1 PAC:27459542 Theobroma cacao 131  
Thecc1EG046427t1 PAC:27459540 Theobroma cacao 155  
Migut.F01471.1.p A0A022RWW0 PAC:28932081 Mimulus guttatus 155  
Araha.11756s0209.1.p PAC:28856274 Arabidopsis halleri 156  
Araha.20392s0004.1.p PAC:28853000 Arabidopsis halleri 148  
Cagra.5120s0010.1.p PAC:28904243 Capsella grandiflora 146  
Brara.K00608.1.p A0A3P6D1X8 PAC:30646943 Brassica rapa FPsc 148  
Bostr.9928s0003.1.p PAC:30672729 Boechera stricta 148  
Medtr3g035660.1 G7J101 PAC:31055557 Medicago truncatula 871  
Medtr0002s0300.1 A0A072TJH4 PAC:31084738 Medicago truncatula 132  
SapurV1A.0471s0040.1.p PAC:31449494 Salix purpurea 216  
evm_27.model.AmTr_v1.0_scaffold02071.1 U5CZS7 PAC:31557046 Amborella trichopoda 131  
Traes_1AL_DEDA1D8A6.1 PAC:31852327 Triticum aestivum 156  
Traes_1AL_335CA216E.1 PAC:31961646 Triticum aestivum 156  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498