Protein Domain : IPR001342

Type:  Domain Name:  Homoserine dehydrogenase, catalytic
Description:  Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see [].Homoserine dehydrogenase () catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coliand in plants. Structural analysis of the yeast monofunctional enzyme () indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet.This entry represents the catalytic domain of homoserine dehydrogenase. Short Name:  HDH_cat

0 Child Features

1 Contains

DB identifier Type Name
IPR019811 Conserved_site Homoserine dehydrogenase, conserved site

1 Cross References

Identifier
PF00742

3 Found Ins

DB identifier Type Name
IPR022697 Family Homoserine dehydrogenase lacking ACT domain
IPR011147 Family Bifunctional aspartokinase/homoserine dehydrogenase I
IPR016204 Family Homoserine dehydrogenase

2 GO Annotations

GO Term Gene Name
GO:0006520 IPR001342
GO:0055114 IPR001342

2 Ontology Annotations

GO Term Gene Name
GO:0006520 IPR001342
GO:0055114 IPR001342

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
411714 D8RIT4 PAC:15410879 Selaginella moellendorffii 1435  
95037 D8RIT6 PAC:15401740 Selaginella moellendorffii 375  
80442 D8QWR7 PAC:15405290 Selaginella moellendorffii 860  
77174 D8QS16 PAC:15416386 Selaginella moellendorffii 370  
evm.model.supercontig_103.70 PAC:16404958 Carica papaya 376  
evm.model.supercontig_21.85 PAC:16413600 Carica papaya 885  
29757.m000730 B9SHP2 PAC:16808004 Ricinus communis 920  
29942.m000731 B9S6K6 PAC:16814290 Ricinus communis 376  
Cucsa.142670.1 A0A0A0LXA2 PAC:16963671 Cucumis sativus 377  
Cucsa.237260.1 A0A0A0KSV2 PAC:16970558 Cucumis sativus 918  
orange1.1g029942m PAC:18098101 Citrus sinensis 185  
orange1.1g040627m A0A067H4W9 PAC:18102707 Citrus sinensis 267  
AT4G19710.1 O81852 PAC:19647525 Arabidopsis thaliana 859  
AT4G19710.2 O81852 PAC:19647524 Arabidopsis thaliana 916  
AT5G21060.2 F4K6Y8 PAC:19671524 Arabidopsis thaliana 378  
AT5G21060.1 Q84JZ4 PAC:19671526 Arabidopsis thaliana 376  
AT5G21060.3 F4K6Y9 PAC:19671525 Arabidopsis thaliana 378  
AT1G31230.1 Q9SA18 PAC:19657036 Arabidopsis thaliana 911  
Thhalv10024340m V4MFV9 PAC:20194313 Eutrema salsugineum 930  
Thhalv10013841m V4LQL7 PAC:20205419 Eutrema salsugineum 377  
Thhalv10006741m V4L1T5 PAC:20186580 Eutrema salsugineum 910  
Ciclev10018756m V4T3Y9 PAC:20807139 Citrus clementina 918  
Ciclev10023926m V4T3X9 PAC:20808761 Citrus clementina 692  
Ciclev10031821m V4TPM1 PAC:20805442 Citrus clementina 381  
Lus10030339 PAC:23153202 Linum usitatissimum 939  
Lus10041071 PAC:23179872 Linum usitatissimum 919  
Lus10034077 PAC:23154814 Linum usitatissimum 376  
Lus10003073 PAC:23154539 Linum usitatissimum 376  
Potri.004G196200.5 PAC:26989575 Populus trichocarpa 247  
Potri.004G196200.3 PAC:26989576 Populus trichocarpa 232  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11352712
            8395899
            8500624
            10700284