Protein Domain : IPR004871

Type:  Domain Name:  Cleavage/polyadenylation specificity factor, A subunit, C-terminal
Description:  This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also beenfound to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involvedin RNA/DNA binding. Short Name:  Cleavage/polyA-sp_fac_asu_C
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0 Child Features

0 Contains

1 Cross References

Identifier
PF03178

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003676 IPR004871
GO:0005634 IPR004871

2 Ontology Annotations

GO Term Gene Name
GO:0003676 IPR004871
GO:0005634 IPR004871

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
171237 D8RG90 PAC:15407276 Selaginella moellendorffii 1207  
82277 D8R080 PAC:15409726 Selaginella moellendorffii 1413  
448595 D8T8D9 PAC:15406837 Selaginella moellendorffii 1292  
145521 D8RBA1 PAC:15421979 Selaginella moellendorffii 1089  
evm.model.supercontig_1.324 PAC:16404260 Carica papaya 1213  
evm.model.supercontig_17.69 PAC:16410793 Carica papaya 842  
evm.model.supercontig_3.264 PAC:16416551 Carica papaya 791  
evm.model.supercontig_85.18 PAC:16427450 Carica papaya 736  
29932.m000602 B9SKT9 PAC:16814087 Ricinus communis 1033  
30147.m014174 B9R9N0 PAC:16820186 Ricinus communis 1461  
29113.m000029 B9T8E6 PAC:16802310 Ricinus communis 1214  
27553.m000320 B9T017 PAC:16798669 Ricinus communis 1220  
Cucsa.178510.1 PAC:16967108 Cucumis sativus 1430  
Cucsa.165660.1 PAC:16966050 Cucumis sativus 1214  
Cucsa.166800.1 PAC:16966193 Cucumis sativus 1093  
Cucsa.242390.1 A0A0A0LEB2 PAC:16971159 Cucumis sativus 1376  
orange1.1g001655m A0A067G9P2 PAC:18114406 Citrus sinensis 1036  
orange1.1g001387m A0A067G6X3 PAC:18114405 Citrus sinensis 1088  
orange1.1g004094m A0A067GJ31 PAC:18114407 Citrus sinensis 774  
orange1.1g014962m A0A067FTY3 PAC:18118106 Citrus sinensis 415  
orange1.1g011732m A0A067G5B5 PAC:18118105 Citrus sinensis 478  
orange1.1g000944m A0A067FKC9 PAC:18095336 Citrus sinensis 1213  
orange1.1g001003m PAC:18127901 Citrus sinensis 1192  
orange1.1g000545m PAC:18127899 Citrus sinensis 1432  
orange1.1g000548m PAC:18127900 Citrus sinensis 1431  
AT4G05420.2 B3H6I9 PAC:19645456 Arabidopsis thaliana 1067  
AT4G05420.1 Q9M0V3 PAC:19645455 Arabidopsis thaliana 1088  
AT4G21100.1 O49552 PAC:19646583 Arabidopsis thaliana 1088  
AT5G51660.1 Q9FGR0 PAC:19671834 Arabidopsis thaliana 1442  
AT3G11960.1 Q84R20 PAC:19662295 Arabidopsis thaliana 1379  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11421366