Protein Domain : IPR026963

Type:  Family Name:  Aprataxin
Description:  Aprataxin is a DNA-binding protein involved in single-strand and double-strand DNA break repair, and base excision repair [, , ]. In yeast the aprataxin orthologue is known as Hnt3 (Hit family protein 3) []. Aprataxin is a member of the histidine triad (HIT) superfamily of nucleotide hydrolases and transferases, named for their characteristic HxHxHxx catalytic motif, where x is a hydrophobic amino acid []. It also contains an N-terminal forkhead associated (FHA) domain, which is thought to mediate interactions with the ligase cofactors XRCC1 and XRCC4, and a C-terminal zinc finger domain implicated in DNA binding [, ].Aprataxin repairs adenylated RNA-DNA junctions []. It resolves abortive DNA ligation intermediates formed either at base excision sites, or when DNA ligases attempt to repair non-ligatable breaks induced by reactive oxygen species. It catalyses the release of adenylate groups covalently linked to 5'-phosphate termini, resulting in the production of 5'-phosphate termini that can be efficiently rejoined []. Mutations in the aprataxin gene cause the neurological disorder ataxia oculomotor apraxia-1 (AOA1). Short Name:  Aprataxin

0 Child Features

0 Contains

1 Cross References

Identifier
PTHR12486:SF4

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0003677 IPR026963
GO:0033699 IPR026963
GO:0006281 IPR026963

3 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR026963
GO:0033699 IPR026963
GO:0006281 IPR026963

1 Parent Features

DB identifier Type Name
IPR001310 Family Histidine triad (HIT) protein

584 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
89021 D8RBW2 PAC:15406214 Selaginella moellendorffii 689  
evm.model.supercontig_120.24 PAC:16406960 Carica papaya 567  
29601.m000441 B9SWY0 PAC:16803518 Ricinus communis 749  
Cucsa.176610.1 PAC:16966911 Cucumis sativus 746  
Cucsa.176610.2 PAC:16966912 Cucumis sativus 603  
orange1.1g004319m A0A067F0M7 PAC:18131607 Citrus sinensis 761  
orange1.1g007244m A0A067ENT3 PAC:18131609 Citrus sinensis 611  
orange1.1g007235m A0A067ENT3 PAC:18131610 Citrus sinensis 611  
orange1.1g006654m A0A067ENJ9 PAC:18131608 Citrus sinensis 636  
AT5G01310.1 Q9M041 PAC:19672009 Arabidopsis thaliana 912  
Thhalv10012562m PAC:20205799 Eutrema salsugineum 994  
Ciclev10011314m V4SPU0 PAC:20797107 Citrus clementina 612  
Ciclev10011130m V4S5I3 PAC:20797106 Citrus clementina 762  
Lus10002216 PAC:23180535 Linum usitatissimum 721  
Lus10003385 PAC:23175199 Linum usitatissimum 719  
Potri.016G120200.3 PAC:27012839 Populus trichocarpa 684  
Potri.016G120200.1 A0A2K1XEK9 PAC:27012837 Populus trichocarpa 741  
Potri.016G120200.2 PAC:27012838 Populus trichocarpa 710  
Gorai.012G116900.2 A0A0D2VYE4 PAC:26826965 Gossypium raimondii 570  
Gorai.012G116900.4 A0A0D2VYE4 PAC:26826966 Gossypium raimondii 570  
Gorai.012G116900.1 A0A0D2S1N1 PAC:26826962 Gossypium raimondii 693  
Gorai.012G116900.3 A0A0D2TN30 PAC:26826963 Gossypium raimondii 651  
Gorai.012G116900.5 A0A0D2V4F5 PAC:26826964 Gossypium raimondii 590  
42402 I0YWL4 PAC:27388634 Coccomyxa subellipsoidea C-169 556  
123946 C1N1Z7 PAC:27339635 Micromonas pusilla CCMP1545 176  
84536 C1FFK5 PAC:27403379 Micromonas sp RCC299 219  
Thecc1EG021648t1 A0A061EQ19 PAC:27421789 Theobroma cacao 1092  
Migut.J00131.2.p PAC:28941215 Mimulus guttatus 664  
Migut.J00131.1.p PAC:28941214 Mimulus guttatus 671  
Araha.3975s0017.1.p PAC:28845995 Arabidopsis halleri 891  

9 Publications

First Author Title Year Journal Volume Pages PubMed ID
            16964241
            15044383
            16547001
            17276982
            24362567
            11586299
            15555565
            15380105
            21984208