Protein Domain : IPR003349

Type:  Domain Name:  JmjN domain
Description:  The JmjN and JmjC domains are two non-adjacent domains which have been identified in the jumonji family of transcription factors. Although it wasoriginally suggested that the JmjN and JmjC domains always co-occur and might form a single functional unit within the folded protein, the JmjC domain waslatter found without the JmjN domain in organisms from bacteria to human [, ].JmJC domains are predicted to be metalloenzymes that adopt the cupin fold, and are candidates for enzymes that regulate chromatin remodelling. The cupin fold is a flattened beta-barrel structure containingtwo sheets of five antiparallel beta strands that form the walls of a zinc- binding cleft. JmjC domains were identified in numerous eukaryotic proteinscontaining domains typical of transcription factors, such as PHD, C2H2, ARID/BRIGHT and zinc fingers [, ]. TheJmjC has been shown to function in a histone demethylation mechanism that is conserved from yeast to human []. Short Name:  JmjN

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF02375
PS51183
SM00545

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
404286 D8QUV3 PAC:15408699 Selaginella moellendorffii 1184  
438136 D8QUC4 PAC:15418855 Selaginella moellendorffii 1267  
98011 PAC:15410540 Selaginella moellendorffii 800  
81310 D8QZX9 PAC:15407321 Selaginella moellendorffii 597  
956 D8SVH4 PAC:15401540 Selaginella moellendorffii 553  
170257 D8RCJ9 PAC:15404403 Selaginella moellendorffii 764  
440762 D8RE62 PAC:15407176 Selaginella moellendorffii 1529  
evm.model.supercontig_162.48 PAC:16410272 Carica papaya 1102  
evm.model.supercontig_4.49 PAC:16419344 Carica papaya 1535  
evm.model.supercontig_43.90 PAC:16420053 Carica papaya 553  
evm.model.supercontig_50.17 PAC:16421632 Carica papaya 594  
evm.model.supercontig_53.93 PAC:16422322 Carica papaya 532  
evm.model.supercontig_90.3 PAC:16428392 Carica papaya 879  
29776.m000471 B9SV64 PAC:16808312 Ricinus communis 935  
30068.m002644 B9RZ08 PAC:16816651 Ricinus communis 780  
30073.m002269 B9S226 PAC:16816852 Ricinus communis 627  
30147.m013814 B9RAP0 PAC:16819830 Ricinus communis 1736  
30190.m011218 B9RCC0 PAC:16823575 Ricinus communis 1509  
29680.m001692 B9S7K7 PAC:16805524 Ricinus communis 1202  
28507.m000165 B9T0B7 PAC:16801002 Ricinus communis 1554  
29611.m000235 B9T1C1 PAC:16803679 Ricinus communis 803  
Cucsa.322040.1 PAC:16977667 Cucumis sativus 884  
Cucsa.322040.2 A0A0A0L6E1 PAC:16977668 Cucumis sativus 869  
Cucsa.391680.1 PAC:16982960 Cucumis sativus 1551  
Cucsa.388180.1 PAC:16982813 Cucumis sativus 641  
Cucsa.137560.1 PAC:16963219 Cucumis sativus 1179  
Cucsa.178490.1 A0A0A0LJK2 PAC:16967104 Cucumis sativus 1235  
Cucsa.312870.1 PAC:16976925 Cucumis sativus 783  
orange1.1g039624m A0A067D210 PAC:18127118 Citrus sinensis 466  
orange1.1g001595m A0A067GD72 PAC:18138533 Citrus sinensis 1048  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11165500
            10838566
            12446723
            16362057