Protein Domain : IPR011530

Type:  Family Name:  Ribosomal RNA adenine dimethylase
Description:  The bacterial enzyme KsgA catalyses the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases in 16S rRNA. This enzyme and the resulting modified adenosine bases appear to be conserved in all species of eubacteria, eukaryotes, and archaea, and in eukaryotic organelles. Bacterial resistance to the aminoglycoside antibiotic kasugamycin involves inactivation of KsgA and resulting loss of the dimethylations, with modest consequences to the overall fitness of the organism. In contrast, the yeast ortholog, Dim1, is essential. In Saccharomyces cerevisiae(Baker's yeast), and presumably in other eukaryotes, the enzyme performs a vital role in pre-rRNA processing in addition to its methylating activity []. Another orthologue is the eukaryotic transcription factor B (TFB), which has a second function; this enzyme is a nuclear-encoded mitochondrial transcription factor and is essential for mitochondrial gene expression []. The best conserved region in these enzymes is located in the N-terminal section and corresponds to a region that is probably involved in S-adenosyl methionine (SAM) binding domain. Short Name:  rRNA_adenine_dimethylase

0 Child Features

2 Contains

DB identifier Type Name
IPR020598 Domain Ribosomal RNA adenine methylase transferase, N-terminal
IPR020596 Conserved_site Ribosomal RNA adenine methylase transferase, conserved site

2 Cross Referencess

Identifier
TIGR00755
MF_00607

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0000179 IPR011530
GO:0006364 IPR011530

2 Ontology Annotations

GO Term Gene Name
GO:0000179 IPR011530
GO:0006364 IPR011530

1 Parent Features

DB identifier Type Name
IPR001737 Family Ribosomal RNA adenine methyltransferase KsgA/Erm

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
116036 D8SFS3 PAC:15421843 Selaginella moellendorffii 312  
185793 D8T632 PAC:15407829 Selaginella moellendorffii 344  
evm.model.supercontig_217.20 PAC:16413806 Carica papaya 367  
evm.model.supercontig_26.213 PAC:16415154 Carica papaya 349  
30174.m009159 B9RDK0 PAC:16822799 Ricinus communis 338  
29634.m002056 B9S682 PAC:16804197 Ricinus communis 366  
28883.m000730 B9ST15 PAC:16801930 Ricinus communis 350  
Cucsa.043250.1 PAC:16953018 Cucumis sativus 300  
Cucsa.258010.1 A0A0A0L7J6 PAC:16972790 Cucumis sativus 347  
Cucsa.291900.1 A0A0A0LY97 PAC:16975284 Cucumis sativus 349  
orange1.1g047897m A0A067G6H4 PAC:18098840 Citrus sinensis 232  
orange1.1g015990m A0A067H1V7 PAC:18136538 Citrus sinensis 397  
orange1.1g016715m A0A067H291 PAC:18136539 Citrus sinensis 384  
orange1.1g018261m A0A067HGE4 PAC:18136490 Citrus sinensis 359  
AT5G66360.2 Q9FK02 PAC:19671379 Arabidopsis thaliana 380  
AT1G01860.1 O65090 PAC:19653114 Arabidopsis thaliana 343  
AT2G47420.1 O22268 PAC:19639452 Arabidopsis thaliana 353  
Thhalv10001522m V4KNA8 PAC:20188804 Eutrema salsugineum 352  
Thhalv10008101m V4LAM4 PAC:20185265 Eutrema salsugineum 344  
Thhalv10005567m V4KIV3 PAC:20198522 Eutrema salsugineum 371  
Ciclev10021091m V4VY93 PAC:20807485 Citrus clementina 330  
Ciclev10020794m V4TW36 PAC:20811841 Citrus clementina 359  
Ciclev10020970m V4U2W3 PAC:20807484 Citrus clementina 343  
Lus10041797 PAC:23146866 Linum usitatissimum 374  
Lus10009319 PAC:23141891 Linum usitatissimum 1073  
Lus10017864 PAC:23148798 Linum usitatissimum 345  
Lus10034669 PAC:23162773 Linum usitatissimum 345  
Potri.018G018900.1 B9IL59 PAC:27010213 Populus trichocarpa 386  
Potri.014G077100.1 PAC:27032943 Populus trichocarpa 339  
Potri.014G077100.2 A0A2K1XS24 PAC:27032944 Populus trichocarpa 338  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15136037
            23804760