Gene : LOC_Os01g03020 O. sativa v7.0
Defline:  (1 of 1) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  163
Name:  ? LOC_Os01g03020 Secondary Identifier:  ? PAC:33120857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa TRNA-CHARGING-PWY Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g03020 0.5kb upstream 0.5kb upstream 9766 true Chr1: 1145829-1155594 Oryza sativa
LOC_Os01g03020 0.5kb upstream 0.5kb upstream 500 false Chr1: 1155095-1155594 Oryza sativa
LOC_Os01g03020 0.5kb downstream 0.5kb downstream 9766 true Chr1: 1145329-1155094 Oryza sativa
LOC_Os01g03020 0.5kb downstream 0.5kb downstream 500 false Chr1: 1145329-1145828 Oryza sativa
LOC_Os01g03020 1.0kb upstream 1.0kb upstream 10266 true Chr1: 1145829-1156094 Oryza sativa
LOC_Os01g03020 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1155095-1156094 Oryza sativa
LOC_Os01g03020 1.0kb downstream 1.0kb downstream 10266 true Chr1: 1144829-1155094 Oryza sativa
LOC_Os01g03020 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1144829-1145828 Oryza sativa
LOC_Os01g03020 2.0kb upstream 2.0kb upstream 11266 true Chr1: 1145829-1157094 Oryza sativa
LOC_Os01g03020 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1155095-1157094 Oryza sativa
LOC_Os01g03020 2.0kb downstream 2.0kb downstream 11266 true Chr1: 1143829-1155094 Oryza sativa
LOC_Os01g03020 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1143829-1145828 Oryza sativa
LOC_Os01g03020 5.0kb upstream 5.0kb upstream 14266 true Chr1: 1145829-1160094 Oryza sativa
LOC_Os01g03020 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1155095-1160094 Oryza sativa
LOC_Os01g03020 5.0kb downstream 5.0kb downstream 14266 true Chr1: 1140829-1155094 Oryza sativa
LOC_Os01g03020 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1140829-1145828 Oryza sativa
LOC_Os01g03020 10.0kb upstream 10.0kb upstream 19266 true Chr1: 1145829-1165094 Oryza sativa
LOC_Os01g03020 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1155095-1165094 Oryza sativa
LOC_Os01g03020 10.0kb downstream 10.0kb downstream 19266 true Chr1: 1135829-1155094 Oryza sativa
LOC_Os01g03020 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1135829-1145828 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
124571312 5269 Grass View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain