Gene : LOC_Os01g09560 O. sativa v7.0
Defline:  (1 of 1) PTHR11851//PTHR11851:SF138 - METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  706
Name:  ? LOC_Os01g09560 Secondary Identifier:  ? PAC:33126106
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-3781 Oryza sativa pathologic  
Osativa PWY-7279 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g09560 0.5kb upstream 0.5kb upstream 5861 true Chr1: 4891016-4896876 Oryza sativa
LOC_Os01g09560 0.5kb upstream 0.5kb upstream 500 false Chr1: 4891016-4891515 Oryza sativa
LOC_Os01g09560 0.5kb downstream 0.5kb downstream 5861 true Chr1: 4891516-4897376 Oryza sativa
LOC_Os01g09560 0.5kb downstream 0.5kb downstream 500 false Chr1: 4896877-4897376 Oryza sativa
LOC_Os01g09560 1.0kb upstream 1.0kb upstream 6361 true Chr1: 4890516-4896876 Oryza sativa
LOC_Os01g09560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4890516-4891515 Oryza sativa
LOC_Os01g09560 1.0kb downstream 1.0kb downstream 6361 true Chr1: 4891516-4897876 Oryza sativa
LOC_Os01g09560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4896877-4897876 Oryza sativa
LOC_Os01g09560 2.0kb upstream 2.0kb upstream 7361 true Chr1: 4889516-4896876 Oryza sativa
LOC_Os01g09560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4889516-4891515 Oryza sativa
LOC_Os01g09560 2.0kb downstream 2.0kb downstream 7361 true Chr1: 4891516-4898876 Oryza sativa
LOC_Os01g09560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4896877-4898876 Oryza sativa
LOC_Os01g09560 5.0kb upstream 5.0kb upstream 10361 true Chr1: 4886516-4896876 Oryza sativa
LOC_Os01g09560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4886516-4891515 Oryza sativa
LOC_Os01g09560 5.0kb downstream 5.0kb downstream 10361 true Chr1: 4891516-4901876 Oryza sativa
LOC_Os01g09560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4896877-4901876 Oryza sativa
LOC_Os01g09560 10.0kb upstream 10.0kb upstream 15361 true Chr1: 4881516-4896876 Oryza sativa
LOC_Os01g09560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4881516-4891515 Oryza sativa
LOC_Os01g09560 10.0kb downstream 10.0kb downstream 15361 true Chr1: 4891516-4906876 Oryza sativa
LOC_Os01g09560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4896877-4906876 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
124574686 5269 Grass View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain