Protein Domain : IPR006941

Type:  Family Name:  Ribonuclease CAF1
Description:  CAF1 is an RNase of the DEDD superfamily, and a subunit of the Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation. The major pathways of mRNA turnover in eukaryotes initiate with shortening of the poly(A) tail. CAF1 encodes a critical component of the major cytoplasmic deadenylase in yeast. Caf1p is required for normal mRNA deadenylation in vivoand localises to the cytoplasm. Caf1p copurifies with a Ccr4p-dependent poly(A)-specific exonuclease activity. Some members of this family contain a single-stranded nucleic acid binding domain, R3H. Short Name:  RNase_CAF1
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1 Child Features

DB identifier Type Name
IPR027212 Family CCR4-NOT transcription complex subunit 8

1 Contains

DB identifier Type Name
IPR001374 Domain R3H domain

1 Cross References

Identifier
PF04857

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0005634 IPR006941

1 Ontology Annotations

GO Term Gene Name
GO:0005634 IPR006941

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
444748 D8SCK0 PAC:15418991 Selaginella moellendorffii 285  
84624 D8R3P7 PAC:15418540 Selaginella moellendorffii 274  
424560 D8SQB1 PAC:15402974 Selaginella moellendorffii 603  
410403 D8REM5 PAC:15405533 Selaginella moellendorffii 648  
evm.model.supercontig_12.117 PAC:16406656 Carica papaya 432  
evm.model.supercontig_127.17 PAC:16407378 Carica papaya 275  
evm.model.supercontig_195.38 PAC:16412291 Carica papaya 277  
evm.model.supercontig_46.129 PAC:16420410 Carica papaya 274  
evm.model.supercontig_462.1 PAC:16420576 Carica papaya 277  
evm.model.supercontig_72.57 PAC:16425559 Carica papaya 380  
evm.model.supercontig_8.63 PAC:16426658 Carica papaya 363  
29848.m004554 B9RNX3 PAC:16811210 Ricinus communis 274  
30055.m001616 B9SCZ3 PAC:16816247 Ricinus communis 281  
30178.m000857 B9SMP5 PAC:16822831 Ricinus communis 624  
29629.m001401 B9S9V2 PAC:16803982 Ricinus communis 699  
28324.m000404 B9SVZ3 PAC:16800614 Ricinus communis 292  
29588.m000858 B9SMT7 PAC:16803232 Ricinus communis 274  
Cucsa.319630.1 PAC:16977268 Cucumis sativus 277  
Cucsa.388320.1 PAC:16982834 Cucumis sativus 610  
Cucsa.042130.1 PAC:16952881 Cucumis sativus 737  
Cucsa.095370.1 PAC:16957869 Cucumis sativus 262  
Cucsa.185830.1 PAC:16967763 Cucumis sativus 260  
Cucsa.162770.2 PAC:16965737 Cucumis sativus 229  
Cucsa.162780.1 A0A0A0LMH2 PAC:16965738 Cucumis sativus 274  
Cucsa.162770.1 A0A0A0LSM4 PAC:16965736 Cucumis sativus 274  
Cucsa.234330.1 PAC:16970379 Cucumis sativus 292  
orange1.1g048636m A0A067DBP7 PAC:18119510 Citrus sinensis 150  
orange1.1g023614m A0A067FTA8 PAC:18118167 Citrus sinensis 280  
orange1.1g025183m A0A067FT67 PAC:18118168 Citrus sinensis 256  
orange1.1g027829m A0A067FWP2 PAC:18118169 Citrus sinensis 218  

0 Publications