Gene : LOC_Os01g54270 O. sativa v7.0
Defline:  (1 of 2) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  3657
Name:  ? LOC_Os01g54270 Secondary Identifier:  ? PAC:33120414
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-7101 Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g54270 0.5kb upstream 0.5kb upstream 8746 true Chr1: 31220321-31229066 Oryza sativa
LOC_Os01g54270 0.5kb upstream 0.5kb upstream 500 false Chr1: 31228567-31229066 Oryza sativa
LOC_Os01g54270 0.5kb downstream 0.5kb downstream 8746 true Chr1: 31219821-31228566 Oryza sativa
LOC_Os01g54270 0.5kb downstream 0.5kb downstream 500 false Chr1: 31219821-31220320 Oryza sativa
LOC_Os01g54270 1.0kb upstream 1.0kb upstream 9246 true Chr1: 31220321-31229566 Oryza sativa
LOC_Os01g54270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 31228567-31229566 Oryza sativa
LOC_Os01g54270 1.0kb downstream 1.0kb downstream 9246 true Chr1: 31219321-31228566 Oryza sativa
LOC_Os01g54270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 31219321-31220320 Oryza sativa
LOC_Os01g54270 2.0kb upstream 2.0kb upstream 10246 true Chr1: 31220321-31230566 Oryza sativa
LOC_Os01g54270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 31228567-31230566 Oryza sativa
LOC_Os01g54270 2.0kb downstream 2.0kb downstream 10246 true Chr1: 31218321-31228566 Oryza sativa
LOC_Os01g54270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 31218321-31220320 Oryza sativa
LOC_Os01g54270 5.0kb upstream 5.0kb upstream 13246 true Chr1: 31220321-31233566 Oryza sativa
LOC_Os01g54270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 31228567-31233566 Oryza sativa
LOC_Os01g54270 5.0kb downstream 5.0kb downstream 13246 true Chr1: 31215321-31228566 Oryza sativa
LOC_Os01g54270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 31215321-31220320 Oryza sativa
LOC_Os01g54270 10.0kb upstream 10.0kb upstream 18246 true Chr1: 31220321-31238566 Oryza sativa
LOC_Os01g54270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 31228567-31238566 Oryza sativa
LOC_Os01g54270 10.0kb downstream 10.0kb downstream 18246 true Chr1: 31210321-31228566 Oryza sativa
LOC_Os01g54270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 31210321-31220320 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587364 5269 Grass View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain