Gene : LOC_Os01g52530 O. sativa v7.0
Defline:  (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  3517
Name:  ? LOC_Os01g52530 Secondary Identifier:  ? PAC:33119454
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY0-662 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os01g52530 0.5kb upstream 0.5kb upstream 4397 true Chr1: 30180081-30184477 Oryza sativa
LOC_Os01g52530 0.5kb upstream 0.5kb upstream 500 false Chr1: 30180081-30180580 Oryza sativa
LOC_Os01g52530 0.5kb downstream 0.5kb downstream 4397 true Chr1: 30180581-30184977 Oryza sativa
LOC_Os01g52530 0.5kb downstream 0.5kb downstream 500 false Chr1: 30184478-30184977 Oryza sativa
LOC_Os01g52530 1.0kb upstream 1.0kb upstream 4897 true Chr1: 30179581-30184477 Oryza sativa
LOC_Os01g52530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30179581-30180580 Oryza sativa
LOC_Os01g52530 1.0kb downstream 1.0kb downstream 4897 true Chr1: 30180581-30185477 Oryza sativa
LOC_Os01g52530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30184478-30185477 Oryza sativa
LOC_Os01g52530 2.0kb upstream 2.0kb upstream 5897 true Chr1: 30178581-30184477 Oryza sativa
LOC_Os01g52530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30178581-30180580 Oryza sativa
LOC_Os01g52530 2.0kb downstream 2.0kb downstream 5897 true Chr1: 30180581-30186477 Oryza sativa
LOC_Os01g52530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30184478-30186477 Oryza sativa
LOC_Os01g52530 5.0kb upstream 5.0kb upstream 8897 true Chr1: 30175581-30184477 Oryza sativa
LOC_Os01g52530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30175581-30180580 Oryza sativa
LOC_Os01g52530 5.0kb downstream 5.0kb downstream 8897 true Chr1: 30180581-30189477 Oryza sativa
LOC_Os01g52530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30184478-30189477 Oryza sativa
LOC_Os01g52530 10.0kb upstream 10.0kb upstream 13897 true Chr1: 30170581-30184477 Oryza sativa
LOC_Os01g52530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30170581-30180580 Oryza sativa
LOC_Os01g52530 10.0kb downstream 10.0kb downstream 13897 true Chr1: 30180581-30194477 Oryza sativa
LOC_Os01g52530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30184478-30194477 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584463 5269 Grass View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain