Gene : LOC_Os10g21192 O. sativa v7.0
Defline:  (1 of 3) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  925
Name:  ? LOC_Os10g21192 Secondary Identifier:  ? PAC:33099820
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PHOTOALL-PWY Oryza sativa pathologic  
Osativa PWY-101 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os10g21192 0.5kb upstream 0.5kb upstream 1562 true Chr10: 10807276-10808837 Oryza sativa
LOC_Os10g21192 0.5kb upstream 0.5kb upstream 500 false Chr10: 10808338-10808837 Oryza sativa
LOC_Os10g21192 0.5kb downstream 0.5kb downstream 1562 true Chr10: 10806776-10808337 Oryza sativa
LOC_Os10g21192 0.5kb downstream 0.5kb downstream 500 false Chr10: 10806776-10807275 Oryza sativa
LOC_Os10g21192 1.0kb upstream 1.0kb upstream 2062 true Chr10: 10807276-10809337 Oryza sativa
LOC_Os10g21192 1.0kb upstream 1.0kb upstream 1000 false Chr10: 10808338-10809337 Oryza sativa
LOC_Os10g21192 1.0kb downstream 1.0kb downstream 2062 true Chr10: 10806276-10808337 Oryza sativa
LOC_Os10g21192 1.0kb downstream 1.0kb downstream 1000 false Chr10: 10806276-10807275 Oryza sativa
LOC_Os10g21192 2.0kb upstream 2.0kb upstream 3062 true Chr10: 10807276-10810337 Oryza sativa
LOC_Os10g21192 2.0kb upstream 2.0kb upstream 2000 false Chr10: 10808338-10810337 Oryza sativa
LOC_Os10g21192 2.0kb downstream 2.0kb downstream 3062 true Chr10: 10805276-10808337 Oryza sativa
LOC_Os10g21192 2.0kb downstream 2.0kb downstream 2000 false Chr10: 10805276-10807275 Oryza sativa
LOC_Os10g21192 5.0kb upstream 5.0kb upstream 6062 true Chr10: 10807276-10813337 Oryza sativa
LOC_Os10g21192 5.0kb upstream 5.0kb upstream 5000 false Chr10: 10808338-10813337 Oryza sativa
LOC_Os10g21192 5.0kb downstream 5.0kb downstream 6062 true Chr10: 10802276-10808337 Oryza sativa
LOC_Os10g21192 5.0kb downstream 5.0kb downstream 5000 false Chr10: 10802276-10807275 Oryza sativa
LOC_Os10g21192 10.0kb upstream 10.0kb upstream 11062 true Chr10: 10807276-10818337 Oryza sativa
LOC_Os10g21192 10.0kb upstream 10.0kb upstream 10000 false Chr10: 10808338-10818337 Oryza sativa
LOC_Os10g21192 10.0kb downstream 10.0kb downstream 11062 true Chr10: 10797276-10808337 Oryza sativa
LOC_Os10g21192 10.0kb downstream 10.0kb downstream 10000 false Chr10: 10797276-10807275 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124567831 5269 Grass View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain