Gene : LOC_Os10g30550 O. sativa v7.0

Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1533
Name:  ? LOC_Os10g30550 Secondary Identifier:  ? PAC:33101944

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa ANAEROFRUCAT-PWY Oryza sativa pathologic  
Osativa ANAGLYCOLYSIS-PWY Oryza sativa pathologic  
Osativa CALVIN-PWY Oryza sativa pathologic  
Osativa GLUCONEO-PWY Oryza sativa pathologic  
Osativa PHOTOALL-PWY Oryza sativa pathologic  
Osativa PWY-1042 Oryza sativa pathologic  
Osativa PWY-5464 Oryza sativa pathologic  
Osativa SUCSYN-PWY Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os10g30550 0.5kb upstream 0.5kb upstream 9382 true Chr10: 15884727-15894108 Oryza sativa
LOC_Os10g30550 0.5kb upstream 0.5kb upstream 500 false Chr10: 15893609-15894108 Oryza sativa
LOC_Os10g30550 0.5kb downstream 0.5kb downstream 9382 true Chr10: 15884227-15893608 Oryza sativa
LOC_Os10g30550 0.5kb downstream 0.5kb downstream 500 false Chr10: 15884227-15884726 Oryza sativa
LOC_Os10g30550 1.0kb upstream 1.0kb upstream 9882 true Chr10: 15884727-15894608 Oryza sativa
LOC_Os10g30550 1.0kb upstream 1.0kb upstream 1000 false Chr10: 15893609-15894608 Oryza sativa
LOC_Os10g30550 1.0kb downstream 1.0kb downstream 9882 true Chr10: 15883727-15893608 Oryza sativa
LOC_Os10g30550 1.0kb downstream 1.0kb downstream 1000 false Chr10: 15883727-15884726 Oryza sativa
LOC_Os10g30550 2.0kb upstream 2.0kb upstream 10882 true Chr10: 15884727-15895608 Oryza sativa
LOC_Os10g30550 2.0kb upstream 2.0kb upstream 2000 false Chr10: 15893609-15895608 Oryza sativa
LOC_Os10g30550 2.0kb downstream 2.0kb downstream 10882 true Chr10: 15882727-15893608 Oryza sativa
LOC_Os10g30550 2.0kb downstream 2.0kb downstream 2000 false Chr10: 15882727-15884726 Oryza sativa
LOC_Os10g30550 5.0kb upstream 5.0kb upstream 13882 true Chr10: 15884727-15898608 Oryza sativa
LOC_Os10g30550 5.0kb upstream 5.0kb upstream 5000 false Chr10: 15893609-15898608 Oryza sativa
LOC_Os10g30550 5.0kb downstream 5.0kb downstream 13882 true Chr10: 15879727-15893608 Oryza sativa
LOC_Os10g30550 5.0kb downstream 5.0kb downstream 5000 false Chr10: 15879727-15884726 Oryza sativa
LOC_Os10g30550 10.0kb upstream 10.0kb upstream 18882 true Chr10: 15884727-15903608 Oryza sativa
LOC_Os10g30550 10.0kb upstream 10.0kb upstream 10000 false Chr10: 15893609-15903608 Oryza sativa
LOC_Os10g30550 10.0kb downstream 10.0kb downstream 18882 true Chr10: 15874727-15893608 Oryza sativa
LOC_Os10g30550 10.0kb downstream 10.0kb downstream 10000 false Chr10: 15874727-15884726 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579298 5269 Grass View MSA
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain