Gene : LOC_Os10g38229 O. sativa v7.0
Defline:  (1 of 5) K02689 - photosystem I P700 chlorophyll a apoprotein A1 (psaA) Genomic Order:  2103
Name:  ? LOC_Os10g38229 Secondary Identifier:  ? PAC:33101847
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PHOTOALL-PWY Oryza sativa pathologic  
Osativa PWY-101 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os10g38229 0.5kb upstream 0.5kb upstream 2753 true Chr10: 20472023-20474775 Oryza sativa
LOC_Os10g38229 0.5kb upstream 0.5kb upstream 500 false Chr10: 20472023-20472522 Oryza sativa
LOC_Os10g38229 0.5kb downstream 0.5kb downstream 2753 true Chr10: 20472523-20475275 Oryza sativa
LOC_Os10g38229 0.5kb downstream 0.5kb downstream 500 false Chr10: 20474776-20475275 Oryza sativa
LOC_Os10g38229 1.0kb upstream 1.0kb upstream 3253 true Chr10: 20471523-20474775 Oryza sativa
LOC_Os10g38229 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20471523-20472522 Oryza sativa
LOC_Os10g38229 1.0kb downstream 1.0kb downstream 3253 true Chr10: 20472523-20475775 Oryza sativa
LOC_Os10g38229 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20474776-20475775 Oryza sativa
LOC_Os10g38229 2.0kb upstream 2.0kb upstream 4253 true Chr10: 20470523-20474775 Oryza sativa
LOC_Os10g38229 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20470523-20472522 Oryza sativa
LOC_Os10g38229 2.0kb downstream 2.0kb downstream 4253 true Chr10: 20472523-20476775 Oryza sativa
LOC_Os10g38229 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20474776-20476775 Oryza sativa
LOC_Os10g38229 5.0kb upstream 5.0kb upstream 7253 true Chr10: 20467523-20474775 Oryza sativa
LOC_Os10g38229 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20467523-20472522 Oryza sativa
LOC_Os10g38229 5.0kb downstream 5.0kb downstream 7253 true Chr10: 20472523-20479775 Oryza sativa
LOC_Os10g38229 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20474776-20479775 Oryza sativa
LOC_Os10g38229 10.0kb upstream 10.0kb upstream 12253 true Chr10: 20462523-20474775 Oryza sativa
LOC_Os10g38229 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20462523-20472522 Oryza sativa
LOC_Os10g38229 10.0kb downstream 10.0kb downstream 12253 true Chr10: 20472523-20484775 Oryza sativa
LOC_Os10g38229 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20474776-20484775 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
124590934 5269 Grass View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain