Gene : LOC_Os11g38930 O. sativa v7.0
Defline:  (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  2389
Name:  ? LOC_Os11g38930 Secondary Identifier:  ? PAC:33163423
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-6689 Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os11g38930 0.5kb upstream 0.5kb upstream 2753 true Chr11: 23176104-23178856 Oryza sativa
LOC_Os11g38930 0.5kb upstream 0.5kb upstream 500 false Chr11: 23176104-23176603 Oryza sativa
LOC_Os11g38930 0.5kb downstream 0.5kb downstream 2753 true Chr11: 23176604-23179356 Oryza sativa
LOC_Os11g38930 0.5kb downstream 0.5kb downstream 500 false Chr11: 23178857-23179356 Oryza sativa
LOC_Os11g38930 1.0kb upstream 1.0kb upstream 3253 true Chr11: 23175604-23178856 Oryza sativa
LOC_Os11g38930 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23175604-23176603 Oryza sativa
LOC_Os11g38930 1.0kb downstream 1.0kb downstream 3253 true Chr11: 23176604-23179856 Oryza sativa
LOC_Os11g38930 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23178857-23179856 Oryza sativa
LOC_Os11g38930 2.0kb upstream 2.0kb upstream 4253 true Chr11: 23174604-23178856 Oryza sativa
LOC_Os11g38930 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23174604-23176603 Oryza sativa
LOC_Os11g38930 2.0kb downstream 2.0kb downstream 4253 true Chr11: 23176604-23180856 Oryza sativa
LOC_Os11g38930 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23178857-23180856 Oryza sativa
LOC_Os11g38930 5.0kb upstream 5.0kb upstream 7253 true Chr11: 23171604-23178856 Oryza sativa
LOC_Os11g38930 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23171604-23176603 Oryza sativa
LOC_Os11g38930 5.0kb downstream 5.0kb downstream 7253 true Chr11: 23176604-23183856 Oryza sativa
LOC_Os11g38930 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23178857-23183856 Oryza sativa
LOC_Os11g38930 10.0kb upstream 10.0kb upstream 12253 true Chr11: 23166604-23178856 Oryza sativa
LOC_Os11g38930 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23166604-23176603 Oryza sativa
LOC_Os11g38930 10.0kb downstream 10.0kb downstream 12253 true Chr11: 23176604-23188856 Oryza sativa
LOC_Os11g38930 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23178857-23188856 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
124584479 5269 Grass View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain