Gene : LOC_Os12g34874 O. sativa v7.0
Defline:  (1 of 1) PTHR21089:SF1 - BIFUNCTIONAL 3-DEHYDROQUINATE DEHYDRATASE/SHIKIMATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  1996
Name:  ? LOC_Os12g34874 Secondary Identifier:  ? PAC:33150842
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa ARO-PWY Oryza sativa pathologic  
Osativa PWY-6163 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os12g34874 0.5kb upstream 0.5kb upstream 5545 true Chr12: 21230079-21235623 Oryza sativa
LOC_Os12g34874 0.5kb upstream 0.5kb upstream 500 false Chr12: 21235124-21235623 Oryza sativa
LOC_Os12g34874 0.5kb downstream 0.5kb downstream 5545 true Chr12: 21229579-21235123 Oryza sativa
LOC_Os12g34874 0.5kb downstream 0.5kb downstream 500 false Chr12: 21229579-21230078 Oryza sativa
LOC_Os12g34874 1.0kb upstream 1.0kb upstream 6045 true Chr12: 21230079-21236123 Oryza sativa
LOC_Os12g34874 1.0kb upstream 1.0kb upstream 1000 false Chr12: 21235124-21236123 Oryza sativa
LOC_Os12g34874 1.0kb downstream 1.0kb downstream 6045 true Chr12: 21229079-21235123 Oryza sativa
LOC_Os12g34874 1.0kb downstream 1.0kb downstream 1000 false Chr12: 21229079-21230078 Oryza sativa
LOC_Os12g34874 2.0kb upstream 2.0kb upstream 7045 true Chr12: 21230079-21237123 Oryza sativa
LOC_Os12g34874 2.0kb upstream 2.0kb upstream 2000 false Chr12: 21235124-21237123 Oryza sativa
LOC_Os12g34874 2.0kb downstream 2.0kb downstream 7045 true Chr12: 21228079-21235123 Oryza sativa
LOC_Os12g34874 2.0kb downstream 2.0kb downstream 2000 false Chr12: 21228079-21230078 Oryza sativa
LOC_Os12g34874 5.0kb upstream 5.0kb upstream 10045 true Chr12: 21230079-21240123 Oryza sativa
LOC_Os12g34874 5.0kb upstream 5.0kb upstream 5000 false Chr12: 21235124-21240123 Oryza sativa
LOC_Os12g34874 5.0kb downstream 5.0kb downstream 10045 true Chr12: 21225079-21235123 Oryza sativa
LOC_Os12g34874 5.0kb downstream 5.0kb downstream 5000 false Chr12: 21225079-21230078 Oryza sativa
LOC_Os12g34874 10.0kb upstream 10.0kb upstream 15045 true Chr12: 21230079-21245123 Oryza sativa
LOC_Os12g34874 10.0kb upstream 10.0kb upstream 10000 false Chr12: 21235124-21245123 Oryza sativa
LOC_Os12g34874 10.0kb downstream 10.0kb downstream 15045 true Chr12: 21220079-21235123 Oryza sativa
LOC_Os12g34874 10.0kb downstream 10.0kb downstream 10000 false Chr12: 21220079-21230078 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583290 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain