Gene : LOC_Os02g17390 O. sativa v7.0
Defline:  (1 of 1) PTHR23309//PTHR23309:SF10 - 3-HYDROXYACYL-COA DEHYROGENASE // PEROXISOMAL FATTY ACID BETA-OXIDATION MULTIFUNCTIONAL PROTEIN AIM1 Genomic Order:  1300
Name:  ? LOC_Os02g17390 Secondary Identifier:  ? PAC:33134202
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa ILEUDEG-PWY Oryza sativa pathologic  
Osativa PWY-5136 Oryza sativa pathologic  
Osativa PWY-5137 Oryza sativa pathologic  
Osativa PWY-5138 Oryza sativa pathologic  
Osativa PWY-561 Oryza sativa pathologic  
Osativa PWY-6435 Oryza sativa pathologic  
Osativa PWY-6837 Oryza sativa pathologic  
Osativa PWY-7036 Oryza sativa pathologic  
Osativa PWY-735 Oryza sativa pathologic  
Osativa PWY-7606 Oryza sativa pathologic  
Osativa VALDEG-PWY Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os02g17390 0.5kb upstream 0.5kb upstream 9265 true Chr2: 10000964-10010228 Oryza sativa
LOC_Os02g17390 0.5kb upstream 0.5kb upstream 500 false Chr2: 10000964-10001463 Oryza sativa
LOC_Os02g17390 0.5kb downstream 0.5kb downstream 9265 true Chr2: 10001464-10010728 Oryza sativa
LOC_Os02g17390 0.5kb downstream 0.5kb downstream 500 false Chr2: 10010229-10010728 Oryza sativa
LOC_Os02g17390 1.0kb upstream 1.0kb upstream 9765 true Chr2: 10000464-10010228 Oryza sativa
LOC_Os02g17390 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10000464-10001463 Oryza sativa
LOC_Os02g17390 1.0kb downstream 1.0kb downstream 9765 true Chr2: 10001464-10011228 Oryza sativa
LOC_Os02g17390 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10010229-10011228 Oryza sativa
LOC_Os02g17390 2.0kb upstream 2.0kb upstream 10765 true Chr2: 9999464-10010228 Oryza sativa
LOC_Os02g17390 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9999464-10001463 Oryza sativa
LOC_Os02g17390 2.0kb downstream 2.0kb downstream 10765 true Chr2: 10001464-10012228 Oryza sativa
LOC_Os02g17390 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10010229-10012228 Oryza sativa
LOC_Os02g17390 5.0kb upstream 5.0kb upstream 13765 true Chr2: 9996464-10010228 Oryza sativa
LOC_Os02g17390 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9996464-10001463 Oryza sativa
LOC_Os02g17390 5.0kb downstream 5.0kb downstream 13765 true Chr2: 10001464-10015228 Oryza sativa
LOC_Os02g17390 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10010229-10015228 Oryza sativa
LOC_Os02g17390 10.0kb upstream 10.0kb upstream 18765 true Chr2: 9991464-10010228 Oryza sativa
LOC_Os02g17390 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9991464-10001463 Oryza sativa
LOC_Os02g17390 10.0kb downstream 10.0kb downstream 18765 true Chr2: 10001464-10020228 Oryza sativa
LOC_Os02g17390 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10010229-10020228 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568788 5269 Grass View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain