Gene : LOC_Os02g13840 O. sativa v7.0
Defline:  (1 of 1) PTHR11739:SF4 - CITRATE SYNTHASE, PEROXISOMAL Genomic Order:  1040
Name:  ? LOC_Os02g13840 Secondary Identifier:  ? PAC:33136861
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa GLYOXYLATE-BYPASS Oryza sativa pathologic  
Osativa PWY-5464 Oryza sativa pathologic  
Osativa PWY-561 Oryza sativa pathologic  
Osativa PWY-5690 Oryza sativa pathologic  
Osativa PWY-6549 Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os02g13840 0.5kb upstream 0.5kb upstream 7227 true Chr2: 7490665-7497891 Oryza sativa
LOC_Os02g13840 0.5kb upstream 0.5kb upstream 500 false Chr2: 7490665-7491164 Oryza sativa
LOC_Os02g13840 0.5kb downstream 0.5kb downstream 7227 true Chr2: 7491165-7498391 Oryza sativa
LOC_Os02g13840 0.5kb downstream 0.5kb downstream 500 false Chr2: 7497892-7498391 Oryza sativa
LOC_Os02g13840 1.0kb upstream 1.0kb upstream 7727 true Chr2: 7490165-7497891 Oryza sativa
LOC_Os02g13840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7490165-7491164 Oryza sativa
LOC_Os02g13840 1.0kb downstream 1.0kb downstream 7727 true Chr2: 7491165-7498891 Oryza sativa
LOC_Os02g13840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7497892-7498891 Oryza sativa
LOC_Os02g13840 2.0kb upstream 2.0kb upstream 8727 true Chr2: 7489165-7497891 Oryza sativa
LOC_Os02g13840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7489165-7491164 Oryza sativa
LOC_Os02g13840 2.0kb downstream 2.0kb downstream 8727 true Chr2: 7491165-7499891 Oryza sativa
LOC_Os02g13840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7497892-7499891 Oryza sativa
LOC_Os02g13840 5.0kb upstream 5.0kb upstream 11727 true Chr2: 7486165-7497891 Oryza sativa
LOC_Os02g13840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7486165-7491164 Oryza sativa
LOC_Os02g13840 5.0kb downstream 5.0kb downstream 11727 true Chr2: 7491165-7502891 Oryza sativa
LOC_Os02g13840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7497892-7502891 Oryza sativa
LOC_Os02g13840 10.0kb upstream 10.0kb upstream 16727 true Chr2: 7481165-7497891 Oryza sativa
LOC_Os02g13840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7481165-7491164 Oryza sativa
LOC_Os02g13840 10.0kb downstream 10.0kb downstream 16727 true Chr2: 7491165-7507891 Oryza sativa
LOC_Os02g13840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7497892-7507891 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570333 5269 Grass View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain