Gene : LOC_Os02g44780 O. sativa v7.0
Defline:  (1 of 1) PTHR12001//PTHR12001:SF41 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE // HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  3150
Name:  ? LOC_Os02g44780 Secondary Identifier:  ? PAC:33139552
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-5120 Oryza sativa pathologic  
Osativa PWY-5910 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os02g44780 0.5kb upstream 0.5kb upstream 4401 true Chr2: 27120562-27124962 Oryza sativa
LOC_Os02g44780 0.5kb upstream 0.5kb upstream 500 false Chr2: 27124463-27124962 Oryza sativa
LOC_Os02g44780 0.5kb downstream 0.5kb downstream 4401 true Chr2: 27120062-27124462 Oryza sativa
LOC_Os02g44780 0.5kb downstream 0.5kb downstream 500 false Chr2: 27120062-27120561 Oryza sativa
LOC_Os02g44780 1.0kb upstream 1.0kb upstream 4901 true Chr2: 27120562-27125462 Oryza sativa
LOC_Os02g44780 1.0kb upstream 1.0kb upstream 1000 false Chr2: 27124463-27125462 Oryza sativa
LOC_Os02g44780 1.0kb downstream 1.0kb downstream 4901 true Chr2: 27119562-27124462 Oryza sativa
LOC_Os02g44780 1.0kb downstream 1.0kb downstream 1000 false Chr2: 27119562-27120561 Oryza sativa
LOC_Os02g44780 2.0kb upstream 2.0kb upstream 5901 true Chr2: 27120562-27126462 Oryza sativa
LOC_Os02g44780 2.0kb upstream 2.0kb upstream 2000 false Chr2: 27124463-27126462 Oryza sativa
LOC_Os02g44780 2.0kb downstream 2.0kb downstream 5901 true Chr2: 27118562-27124462 Oryza sativa
LOC_Os02g44780 2.0kb downstream 2.0kb downstream 2000 false Chr2: 27118562-27120561 Oryza sativa
LOC_Os02g44780 5.0kb upstream 5.0kb upstream 8901 true Chr2: 27120562-27129462 Oryza sativa
LOC_Os02g44780 5.0kb upstream 5.0kb upstream 5000 false Chr2: 27124463-27129462 Oryza sativa
LOC_Os02g44780 5.0kb downstream 5.0kb downstream 8901 true Chr2: 27115562-27124462 Oryza sativa
LOC_Os02g44780 5.0kb downstream 5.0kb downstream 5000 false Chr2: 27115562-27120561 Oryza sativa
LOC_Os02g44780 10.0kb upstream 10.0kb upstream 13901 true Chr2: 27120562-27134462 Oryza sativa
LOC_Os02g44780 10.0kb upstream 10.0kb upstream 10000 false Chr2: 27124463-27134462 Oryza sativa
LOC_Os02g44780 10.0kb downstream 10.0kb downstream 13901 true Chr2: 27110562-27124462 Oryza sativa
LOC_Os02g44780 10.0kb downstream 10.0kb downstream 10000 false Chr2: 27110562-27120561 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576074 5269 Grass View MSA
122045849 5273 Angiosperm View MSA
121310516 5274 Embryophyte View MSA
123347979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain