Gene : LOC_Os03g18820 O. sativa v7.0

Defline:  (1 of 1) PTHR31311//PTHR31311:SF5 - FAMILY NOT NAMED // XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED Genomic Order:  1501
Name:  ? LOC_Os03g18820 Secondary Identifier:  ? PAC:33129173

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-5936 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os03g18820 0.5kb upstream 0.5kb upstream 2987 true Chr3: 10547028-10550014 Oryza sativa
LOC_Os03g18820 0.5kb upstream 0.5kb upstream 500 false Chr3: 10549515-10550014 Oryza sativa
LOC_Os03g18820 0.5kb downstream 0.5kb downstream 2987 true Chr3: 10546528-10549514 Oryza sativa
LOC_Os03g18820 0.5kb downstream 0.5kb downstream 500 false Chr3: 10546528-10547027 Oryza sativa
LOC_Os03g18820 1.0kb upstream 1.0kb upstream 3487 true Chr3: 10547028-10550514 Oryza sativa
LOC_Os03g18820 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10549515-10550514 Oryza sativa
LOC_Os03g18820 1.0kb downstream 1.0kb downstream 3487 true Chr3: 10546028-10549514 Oryza sativa
LOC_Os03g18820 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10546028-10547027 Oryza sativa
LOC_Os03g18820 2.0kb upstream 2.0kb upstream 4487 true Chr3: 10547028-10551514 Oryza sativa
LOC_Os03g18820 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10549515-10551514 Oryza sativa
LOC_Os03g18820 2.0kb downstream 2.0kb downstream 4487 true Chr3: 10545028-10549514 Oryza sativa
LOC_Os03g18820 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10545028-10547027 Oryza sativa
LOC_Os03g18820 5.0kb upstream 5.0kb upstream 7487 true Chr3: 10547028-10554514 Oryza sativa
LOC_Os03g18820 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10549515-10554514 Oryza sativa
LOC_Os03g18820 5.0kb downstream 5.0kb downstream 7487 true Chr3: 10542028-10549514 Oryza sativa
LOC_Os03g18820 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10542028-10547027 Oryza sativa
LOC_Os03g18820 10.0kb upstream 10.0kb upstream 12487 true Chr3: 10547028-10559514 Oryza sativa
LOC_Os03g18820 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10549515-10559514 Oryza sativa
LOC_Os03g18820 10.0kb downstream 10.0kb downstream 12487 true Chr3: 10537028-10549514 Oryza sativa
LOC_Os03g18820 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10537028-10547027 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575812 5269 Grass View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain