Gene : LOC_Os03g50540 O. sativa v7.0
Defline:  (1 of 1) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  3513
Name:  ? LOC_Os03g50540 Secondary Identifier:  ? PAC:33130986
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-3781 Oryza sativa pathologic  
Osativa PWY-4302 Oryza sativa pathologic  
Osativa PWY-5083 Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os03g50540 0.5kb upstream 0.5kb upstream 5017 true Chr3: 28855620-28860636 Oryza sativa
LOC_Os03g50540 0.5kb upstream 0.5kb upstream 500 false Chr3: 28860137-28860636 Oryza sativa
LOC_Os03g50540 0.5kb downstream 0.5kb downstream 5017 true Chr3: 28855120-28860136 Oryza sativa
LOC_Os03g50540 0.5kb downstream 0.5kb downstream 500 false Chr3: 28855120-28855619 Oryza sativa
LOC_Os03g50540 1.0kb upstream 1.0kb upstream 5517 true Chr3: 28855620-28861136 Oryza sativa
LOC_Os03g50540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 28860137-28861136 Oryza sativa
LOC_Os03g50540 1.0kb downstream 1.0kb downstream 5517 true Chr3: 28854620-28860136 Oryza sativa
LOC_Os03g50540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 28854620-28855619 Oryza sativa
LOC_Os03g50540 2.0kb upstream 2.0kb upstream 6517 true Chr3: 28855620-28862136 Oryza sativa
LOC_Os03g50540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 28860137-28862136 Oryza sativa
LOC_Os03g50540 2.0kb downstream 2.0kb downstream 6517 true Chr3: 28853620-28860136 Oryza sativa
LOC_Os03g50540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 28853620-28855619 Oryza sativa
LOC_Os03g50540 5.0kb upstream 5.0kb upstream 9517 true Chr3: 28855620-28865136 Oryza sativa
LOC_Os03g50540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 28860137-28865136 Oryza sativa
LOC_Os03g50540 5.0kb downstream 5.0kb downstream 9517 true Chr3: 28850620-28860136 Oryza sativa
LOC_Os03g50540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 28850620-28855619 Oryza sativa
LOC_Os03g50540 10.0kb upstream 10.0kb upstream 14517 true Chr3: 28855620-28870136 Oryza sativa
LOC_Os03g50540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 28860137-28870136 Oryza sativa
LOC_Os03g50540 10.0kb downstream 10.0kb downstream 14517 true Chr3: 28845620-28860136 Oryza sativa
LOC_Os03g50540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 28845620-28855619 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571423 5269 Grass View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain