Gene : LOC_Os04g02900 O. sativa v7.0
Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  120
Name:  ? LOC_Os04g02900 Secondary Identifier:  ? PAC:33111371
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-5173 Oryza sativa pathologic  
Osativa PWY-5464 Oryza sativa pathologic  
Osativa PYRUVDEHYD-PWY Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os04g02900 0.5kb upstream 0.5kb upstream 4561 true Chr4: 1135379-1139939 Oryza sativa
LOC_Os04g02900 0.5kb upstream 0.5kb upstream 500 false Chr4: 1135379-1135878 Oryza sativa
LOC_Os04g02900 0.5kb downstream 0.5kb downstream 4561 true Chr4: 1135879-1140439 Oryza sativa
LOC_Os04g02900 0.5kb downstream 0.5kb downstream 500 false Chr4: 1139940-1140439 Oryza sativa
LOC_Os04g02900 1.0kb upstream 1.0kb upstream 5061 true Chr4: 1134879-1139939 Oryza sativa
LOC_Os04g02900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1134879-1135878 Oryza sativa
LOC_Os04g02900 1.0kb downstream 1.0kb downstream 5061 true Chr4: 1135879-1140939 Oryza sativa
LOC_Os04g02900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1139940-1140939 Oryza sativa
LOC_Os04g02900 2.0kb upstream 2.0kb upstream 6061 true Chr4: 1133879-1139939 Oryza sativa
LOC_Os04g02900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1133879-1135878 Oryza sativa
LOC_Os04g02900 2.0kb downstream 2.0kb downstream 6061 true Chr4: 1135879-1141939 Oryza sativa
LOC_Os04g02900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1139940-1141939 Oryza sativa
LOC_Os04g02900 5.0kb upstream 5.0kb upstream 9061 true Chr4: 1130879-1139939 Oryza sativa
LOC_Os04g02900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1130879-1135878 Oryza sativa
LOC_Os04g02900 5.0kb downstream 5.0kb downstream 9061 true Chr4: 1135879-1144939 Oryza sativa
LOC_Os04g02900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1139940-1144939 Oryza sativa
LOC_Os04g02900 10.0kb upstream 10.0kb upstream 14061 true Chr4: 1125879-1139939 Oryza sativa
LOC_Os04g02900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1125879-1135878 Oryza sativa
LOC_Os04g02900 10.0kb downstream 10.0kb downstream 14061 true Chr4: 1135879-1149939 Oryza sativa
LOC_Os04g02900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1139940-1149939 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579734 5269 Grass View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain