Gene : LOC_Os04g45800 O. sativa v7.0
Defline:  (1 of 2) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2615
Name:  ? LOC_Os04g45800 Secondary Identifier:  ? PAC:33110958
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-5129 Oryza sativa pathologic  
Osativa PWY-6483 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os04g45800 0.5kb upstream 0.5kb upstream 7812 true Chr4: 27110670-27118481 Oryza sativa
LOC_Os04g45800 0.5kb upstream 0.5kb upstream 500 false Chr4: 27110670-27111169 Oryza sativa
LOC_Os04g45800 0.5kb downstream 0.5kb downstream 7812 true Chr4: 27111170-27118981 Oryza sativa
LOC_Os04g45800 0.5kb downstream 0.5kb downstream 500 false Chr4: 27118482-27118981 Oryza sativa
LOC_Os04g45800 1.0kb upstream 1.0kb upstream 8312 true Chr4: 27110170-27118481 Oryza sativa
LOC_Os04g45800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 27110170-27111169 Oryza sativa
LOC_Os04g45800 1.0kb downstream 1.0kb downstream 8312 true Chr4: 27111170-27119481 Oryza sativa
LOC_Os04g45800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 27118482-27119481 Oryza sativa
LOC_Os04g45800 2.0kb upstream 2.0kb upstream 9312 true Chr4: 27109170-27118481 Oryza sativa
LOC_Os04g45800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 27109170-27111169 Oryza sativa
LOC_Os04g45800 2.0kb downstream 2.0kb downstream 9312 true Chr4: 27111170-27120481 Oryza sativa
LOC_Os04g45800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 27118482-27120481 Oryza sativa
LOC_Os04g45800 5.0kb upstream 5.0kb upstream 12312 true Chr4: 27106170-27118481 Oryza sativa
LOC_Os04g45800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 27106170-27111169 Oryza sativa
LOC_Os04g45800 5.0kb downstream 5.0kb downstream 12312 true Chr4: 27111170-27123481 Oryza sativa
LOC_Os04g45800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 27118482-27123481 Oryza sativa
LOC_Os04g45800 10.0kb upstream 10.0kb upstream 17312 true Chr4: 27101170-27118481 Oryza sativa
LOC_Os04g45800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 27101170-27111169 Oryza sativa
LOC_Os04g45800 10.0kb downstream 10.0kb downstream 17312 true Chr4: 27111170-27128481 Oryza sativa
LOC_Os04g45800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 27118482-27128481 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569465 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain