Gene : LOC_Os05g03100 O. sativa v7.0
Defline:  (1 of 1) PTHR11254//PTHR11254:SF327 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Genomic Order:  181
Name:  ? LOC_Os05g03100 Secondary Identifier:  ? PAC:33155710
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-7511 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os05g03100 0.5kb upstream 0.5kb upstream 6595 true Chr5: 1223463-1230057 Oryza sativa
LOC_Os05g03100 0.5kb upstream 0.5kb upstream 500 false Chr5: 1223463-1223962 Oryza sativa
LOC_Os05g03100 0.5kb downstream 0.5kb downstream 6595 true Chr5: 1223963-1230557 Oryza sativa
LOC_Os05g03100 0.5kb downstream 0.5kb downstream 500 false Chr5: 1230058-1230557 Oryza sativa
LOC_Os05g03100 1.0kb upstream 1.0kb upstream 7095 true Chr5: 1222963-1230057 Oryza sativa
LOC_Os05g03100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1222963-1223962 Oryza sativa
LOC_Os05g03100 1.0kb downstream 1.0kb downstream 7095 true Chr5: 1223963-1231057 Oryza sativa
LOC_Os05g03100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1230058-1231057 Oryza sativa
LOC_Os05g03100 2.0kb upstream 2.0kb upstream 8095 true Chr5: 1221963-1230057 Oryza sativa
LOC_Os05g03100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1221963-1223962 Oryza sativa
LOC_Os05g03100 2.0kb downstream 2.0kb downstream 8095 true Chr5: 1223963-1232057 Oryza sativa
LOC_Os05g03100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1230058-1232057 Oryza sativa
LOC_Os05g03100 5.0kb upstream 5.0kb upstream 11095 true Chr5: 1218963-1230057 Oryza sativa
LOC_Os05g03100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1218963-1223962 Oryza sativa
LOC_Os05g03100 5.0kb downstream 5.0kb downstream 11095 true Chr5: 1223963-1235057 Oryza sativa
LOC_Os05g03100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1230058-1235057 Oryza sativa
LOC_Os05g03100 10.0kb upstream 10.0kb upstream 16095 true Chr5: 1213963-1230057 Oryza sativa
LOC_Os05g03100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1213963-1223962 Oryza sativa
LOC_Os05g03100 10.0kb downstream 10.0kb downstream 16095 true Chr5: 1223963-1240057 Oryza sativa
LOC_Os05g03100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1230058-1240057 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574381 5269 Grass View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain