Gene : LOC_Os05g48820 O. sativa v7.0
Defline:  (1 of 1) PF00046//PF02791//PF05066//PF15612//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  3084
Name:  ? LOC_Os05g48820 Secondary Identifier:  ? PAC:33156936
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os05g48820 0.5kb upstream 0.5kb upstream 11216 true Chr5: 27975656-27986871 Oryza sativa
LOC_Os05g48820 0.5kb upstream 0.5kb upstream 500 false Chr5: 27986372-27986871 Oryza sativa
LOC_Os05g48820 0.5kb downstream 0.5kb downstream 11216 true Chr5: 27975156-27986371 Oryza sativa
LOC_Os05g48820 0.5kb downstream 0.5kb downstream 500 false Chr5: 27975156-27975655 Oryza sativa
LOC_Os05g48820 1.0kb upstream 1.0kb upstream 11716 true Chr5: 27975656-27987371 Oryza sativa
LOC_Os05g48820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 27986372-27987371 Oryza sativa
LOC_Os05g48820 1.0kb downstream 1.0kb downstream 11716 true Chr5: 27974656-27986371 Oryza sativa
LOC_Os05g48820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 27974656-27975655 Oryza sativa
LOC_Os05g48820 2.0kb upstream 2.0kb upstream 12716 true Chr5: 27975656-27988371 Oryza sativa
LOC_Os05g48820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 27986372-27988371 Oryza sativa
LOC_Os05g48820 2.0kb downstream 2.0kb downstream 12716 true Chr5: 27973656-27986371 Oryza sativa
LOC_Os05g48820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 27973656-27975655 Oryza sativa
LOC_Os05g48820 5.0kb upstream 5.0kb upstream 15716 true Chr5: 27975656-27991371 Oryza sativa
LOC_Os05g48820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 27986372-27991371 Oryza sativa
LOC_Os05g48820 5.0kb downstream 5.0kb downstream 15716 true Chr5: 27970656-27986371 Oryza sativa
LOC_Os05g48820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 27970656-27975655 Oryza sativa
LOC_Os05g48820 10.0kb upstream 10.0kb upstream 20716 true Chr5: 27975656-27996371 Oryza sativa
LOC_Os05g48820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 27986372-27996371 Oryza sativa
LOC_Os05g48820 10.0kb downstream 10.0kb downstream 20716 true Chr5: 27965656-27986371 Oryza sativa
LOC_Os05g48820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 27965656-27975655 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585412 5269 Grass View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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