Gene : LOC_Os05g45720 O. sativa v7.0
Defline:  (1 of 2) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  2852
Name:  ? LOC_Os05g45720 Secondary Identifier:  ? PAC:33157822
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa GLYCOGENSYNTH-PWY Oryza sativa pathologic  
Osativa PWY-622 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os05g45720 0.5kb upstream 0.5kb upstream 8806 true Chr5: 26485307-26494112 Oryza sativa
LOC_Os05g45720 0.5kb upstream 0.5kb upstream 500 false Chr5: 26485307-26485806 Oryza sativa
LOC_Os05g45720 0.5kb downstream 0.5kb downstream 8806 true Chr5: 26485807-26494612 Oryza sativa
LOC_Os05g45720 0.5kb downstream 0.5kb downstream 500 false Chr5: 26494113-26494612 Oryza sativa
LOC_Os05g45720 1.0kb upstream 1.0kb upstream 9306 true Chr5: 26484807-26494112 Oryza sativa
LOC_Os05g45720 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26484807-26485806 Oryza sativa
LOC_Os05g45720 1.0kb downstream 1.0kb downstream 9306 true Chr5: 26485807-26495112 Oryza sativa
LOC_Os05g45720 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26494113-26495112 Oryza sativa
LOC_Os05g45720 2.0kb upstream 2.0kb upstream 10306 true Chr5: 26483807-26494112 Oryza sativa
LOC_Os05g45720 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26483807-26485806 Oryza sativa
LOC_Os05g45720 2.0kb downstream 2.0kb downstream 10306 true Chr5: 26485807-26496112 Oryza sativa
LOC_Os05g45720 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26494113-26496112 Oryza sativa
LOC_Os05g45720 5.0kb upstream 5.0kb upstream 13306 true Chr5: 26480807-26494112 Oryza sativa
LOC_Os05g45720 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26480807-26485806 Oryza sativa
LOC_Os05g45720 5.0kb downstream 5.0kb downstream 13306 true Chr5: 26485807-26499112 Oryza sativa
LOC_Os05g45720 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26494113-26499112 Oryza sativa
LOC_Os05g45720 10.0kb upstream 10.0kb upstream 18306 true Chr5: 26475807-26494112 Oryza sativa
LOC_Os05g45720 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26475807-26485806 Oryza sativa
LOC_Os05g45720 10.0kb downstream 10.0kb downstream 18306 true Chr5: 26485807-26504112 Oryza sativa
LOC_Os05g45720 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26494113-26504112 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578861 5269 Grass View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain