Gene : LOC_Os05g48880 O. sativa v7.0
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Genomic Order:  3091
Name:  ? LOC_Os05g48880 Secondary Identifier:  ? PAC:33158785
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os05g48880 0.5kb upstream 0.5kb upstream 3013 true Chr5: 28040183-28043195 Oryza sativa
LOC_Os05g48880 0.5kb upstream 0.5kb upstream 500 false Chr5: 28042696-28043195 Oryza sativa
LOC_Os05g48880 0.5kb downstream 0.5kb downstream 3013 true Chr5: 28039683-28042695 Oryza sativa
LOC_Os05g48880 0.5kb downstream 0.5kb downstream 500 false Chr5: 28039683-28040182 Oryza sativa
LOC_Os05g48880 1.0kb upstream 1.0kb upstream 3513 true Chr5: 28040183-28043695 Oryza sativa
LOC_Os05g48880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 28042696-28043695 Oryza sativa
LOC_Os05g48880 1.0kb downstream 1.0kb downstream 3513 true Chr5: 28039183-28042695 Oryza sativa
LOC_Os05g48880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 28039183-28040182 Oryza sativa
LOC_Os05g48880 2.0kb upstream 2.0kb upstream 4513 true Chr5: 28040183-28044695 Oryza sativa
LOC_Os05g48880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 28042696-28044695 Oryza sativa
LOC_Os05g48880 2.0kb downstream 2.0kb downstream 4513 true Chr5: 28038183-28042695 Oryza sativa
LOC_Os05g48880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 28038183-28040182 Oryza sativa
LOC_Os05g48880 5.0kb upstream 5.0kb upstream 7513 true Chr5: 28040183-28047695 Oryza sativa
LOC_Os05g48880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 28042696-28047695 Oryza sativa
LOC_Os05g48880 5.0kb downstream 5.0kb downstream 7513 true Chr5: 28035183-28042695 Oryza sativa
LOC_Os05g48880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 28035183-28040182 Oryza sativa
LOC_Os05g48880 10.0kb upstream 10.0kb upstream 12513 true Chr5: 28040183-28052695 Oryza sativa
LOC_Os05g48880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 28042696-28052695 Oryza sativa
LOC_Os05g48880 10.0kb downstream 10.0kb downstream 12513 true Chr5: 28030183-28042695 Oryza sativa
LOC_Os05g48880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 28030183-28040182 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124567888 5269 Grass View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain