Gene : LOC_Os06g06560 O. sativa v7.0
Defline:  (1 of 1) PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  458
Name:  ? LOC_Os06g06560 Secondary Identifier:  ? PAC:33146652
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa GLYCOGENSYNTH-PWY Oryza sativa pathologic  
Osativa PWY-622 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os06g06560 0.5kb upstream 0.5kb upstream 8250 true Chr6: 3079059-3087308 Oryza sativa
LOC_Os06g06560 0.5kb upstream 0.5kb upstream 500 false Chr6: 3086809-3087308 Oryza sativa
LOC_Os06g06560 0.5kb downstream 0.5kb downstream 8250 true Chr6: 3078559-3086808 Oryza sativa
LOC_Os06g06560 0.5kb downstream 0.5kb downstream 500 false Chr6: 3078559-3079058 Oryza sativa
LOC_Os06g06560 1.0kb upstream 1.0kb upstream 8750 true Chr6: 3079059-3087808 Oryza sativa
LOC_Os06g06560 1.0kb upstream 1.0kb upstream 1000 false Chr6: 3086809-3087808 Oryza sativa
LOC_Os06g06560 1.0kb downstream 1.0kb downstream 8750 true Chr6: 3078059-3086808 Oryza sativa
LOC_Os06g06560 1.0kb downstream 1.0kb downstream 1000 false Chr6: 3078059-3079058 Oryza sativa
LOC_Os06g06560 2.0kb upstream 2.0kb upstream 9750 true Chr6: 3079059-3088808 Oryza sativa
LOC_Os06g06560 2.0kb upstream 2.0kb upstream 2000 false Chr6: 3086809-3088808 Oryza sativa
LOC_Os06g06560 2.0kb downstream 2.0kb downstream 9750 true Chr6: 3077059-3086808 Oryza sativa
LOC_Os06g06560 2.0kb downstream 2.0kb downstream 2000 false Chr6: 3077059-3079058 Oryza sativa
LOC_Os06g06560 5.0kb upstream 5.0kb upstream 12750 true Chr6: 3079059-3091808 Oryza sativa
LOC_Os06g06560 5.0kb upstream 5.0kb upstream 5000 false Chr6: 3086809-3091808 Oryza sativa
LOC_Os06g06560 5.0kb downstream 5.0kb downstream 12750 true Chr6: 3074059-3086808 Oryza sativa
LOC_Os06g06560 5.0kb downstream 5.0kb downstream 5000 false Chr6: 3074059-3079058 Oryza sativa
LOC_Os06g06560 10.0kb upstream 10.0kb upstream 17750 true Chr6: 3079059-3096808 Oryza sativa
LOC_Os06g06560 10.0kb upstream 10.0kb upstream 10000 false Chr6: 3086809-3096808 Oryza sativa
LOC_Os06g06560 10.0kb downstream 10.0kb downstream 17750 true Chr6: 3069059-3086808 Oryza sativa
LOC_Os06g06560 10.0kb downstream 10.0kb downstream 10000 false Chr6: 3069059-3079058 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573118 5269 Grass View MSA
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain