Gene : LOC_Os06g42560 O. sativa v7.0
Defline:  (1 of 1) K06001 - tryptophan synthase beta chain (trpB) Genomic Order:  2748
Name:  ? LOC_Os06g42560 Secondary Identifier:  ? PAC:33146081
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-4161 Oryza sativa pathologic  
Osativa PWY-6949 Oryza sativa pathologic  
Osativa TRPSYN-PWY Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os06g42560 0.5kb upstream 0.5kb upstream 4756 true Chr6: 25590233-25594988 Oryza sativa
LOC_Os06g42560 0.5kb upstream 0.5kb upstream 500 false Chr6: 25594489-25594988 Oryza sativa
LOC_Os06g42560 0.5kb downstream 0.5kb downstream 4756 true Chr6: 25589733-25594488 Oryza sativa
LOC_Os06g42560 0.5kb downstream 0.5kb downstream 500 false Chr6: 25589733-25590232 Oryza sativa
LOC_Os06g42560 1.0kb upstream 1.0kb upstream 5256 true Chr6: 25590233-25595488 Oryza sativa
LOC_Os06g42560 1.0kb upstream 1.0kb upstream 1000 false Chr6: 25594489-25595488 Oryza sativa
LOC_Os06g42560 1.0kb downstream 1.0kb downstream 5256 true Chr6: 25589233-25594488 Oryza sativa
LOC_Os06g42560 1.0kb downstream 1.0kb downstream 1000 false Chr6: 25589233-25590232 Oryza sativa
LOC_Os06g42560 2.0kb upstream 2.0kb upstream 6256 true Chr6: 25590233-25596488 Oryza sativa
LOC_Os06g42560 2.0kb upstream 2.0kb upstream 2000 false Chr6: 25594489-25596488 Oryza sativa
LOC_Os06g42560 2.0kb downstream 2.0kb downstream 6256 true Chr6: 25588233-25594488 Oryza sativa
LOC_Os06g42560 2.0kb downstream 2.0kb downstream 2000 false Chr6: 25588233-25590232 Oryza sativa
LOC_Os06g42560 5.0kb upstream 5.0kb upstream 9256 true Chr6: 25590233-25599488 Oryza sativa
LOC_Os06g42560 5.0kb upstream 5.0kb upstream 5000 false Chr6: 25594489-25599488 Oryza sativa
LOC_Os06g42560 5.0kb downstream 5.0kb downstream 9256 true Chr6: 25585233-25594488 Oryza sativa
LOC_Os06g42560 5.0kb downstream 5.0kb downstream 5000 false Chr6: 25585233-25590232 Oryza sativa
LOC_Os06g42560 10.0kb upstream 10.0kb upstream 14256 true Chr6: 25590233-25604488 Oryza sativa
LOC_Os06g42560 10.0kb upstream 10.0kb upstream 10000 false Chr6: 25594489-25604488 Oryza sativa
LOC_Os06g42560 10.0kb downstream 10.0kb downstream 14256 true Chr6: 25580233-25594488 Oryza sativa
LOC_Os06g42560 10.0kb downstream 10.0kb downstream 10000 false Chr6: 25580233-25590232 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571287 5269 Grass View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain