Gene : LOC_Os06g51290 O. sativa v7.0
Defline:  (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  3471
Name:  ? LOC_Os06g51290 Secondary Identifier:  ? PAC:33148822
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa CAROTENOID-PWY Oryza sativa pathologic  
Osativa PWY-6475 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os06g51290 0.5kb upstream 0.5kb upstream 4456 true Chr6: 31051971-31056426 Oryza sativa
LOC_Os06g51290 0.5kb upstream 0.5kb upstream 500 false Chr6: 31055927-31056426 Oryza sativa
LOC_Os06g51290 0.5kb downstream 0.5kb downstream 4456 true Chr6: 31051471-31055926 Oryza sativa
LOC_Os06g51290 0.5kb downstream 0.5kb downstream 500 false Chr6: 31051471-31051970 Oryza sativa
LOC_Os06g51290 1.0kb upstream 1.0kb upstream 4956 true Chr6: 31051971-31056926 Oryza sativa
LOC_Os06g51290 1.0kb upstream 1.0kb upstream 1000 false Chr6: 31055927-31056926 Oryza sativa
LOC_Os06g51290 1.0kb downstream 1.0kb downstream 4956 true Chr6: 31050971-31055926 Oryza sativa
LOC_Os06g51290 1.0kb downstream 1.0kb downstream 1000 false Chr6: 31050971-31051970 Oryza sativa
LOC_Os06g51290 2.0kb upstream 2.0kb upstream 5956 true Chr6: 31051971-31057926 Oryza sativa
LOC_Os06g51290 2.0kb upstream 2.0kb upstream 2000 false Chr6: 31055927-31057926 Oryza sativa
LOC_Os06g51290 2.0kb downstream 2.0kb downstream 5956 true Chr6: 31049971-31055926 Oryza sativa
LOC_Os06g51290 2.0kb downstream 2.0kb downstream 2000 false Chr6: 31049971-31051970 Oryza sativa
LOC_Os06g51290 5.0kb upstream 5.0kb upstream 8956 true Chr6: 31051971-31060926 Oryza sativa
LOC_Os06g51290 5.0kb upstream 5.0kb upstream 5000 false Chr6: 31055927-31060926 Oryza sativa
LOC_Os06g51290 5.0kb downstream 5.0kb downstream 8956 true Chr6: 31046971-31055926 Oryza sativa
LOC_Os06g51290 5.0kb downstream 5.0kb downstream 5000 false Chr6: 31046971-31051970 Oryza sativa
LOC_Os06g51290 10.0kb upstream 10.0kb upstream 13956 true Chr6: 31051971-31065926 Oryza sativa
LOC_Os06g51290 10.0kb upstream 10.0kb upstream 10000 false Chr6: 31055927-31065926 Oryza sativa
LOC_Os06g51290 10.0kb downstream 10.0kb downstream 13956 true Chr6: 31041971-31055926 Oryza sativa
LOC_Os06g51290 10.0kb downstream 10.0kb downstream 10000 false Chr6: 31041971-31051970 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
124577082 5269 Grass View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain