Gene : LOC_Os06g48950 O. sativa v7.0
Defline:  (1 of 14) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  3271
Name:  ? LOC_Os06g48950 Secondary Identifier:  ? PAC:33149545
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os06g48950 0.5kb upstream 0.5kb upstream 8727 true Chr6: 29656469-29665195 Oryza sativa
LOC_Os06g48950 0.5kb upstream 0.5kb upstream 500 false Chr6: 29656469-29656968 Oryza sativa
LOC_Os06g48950 0.5kb downstream 0.5kb downstream 8727 true Chr6: 29656969-29665695 Oryza sativa
LOC_Os06g48950 0.5kb downstream 0.5kb downstream 500 false Chr6: 29665196-29665695 Oryza sativa
LOC_Os06g48950 1.0kb upstream 1.0kb upstream 9227 true Chr6: 29655969-29665195 Oryza sativa
LOC_Os06g48950 1.0kb upstream 1.0kb upstream 1000 false Chr6: 29655969-29656968 Oryza sativa
LOC_Os06g48950 1.0kb downstream 1.0kb downstream 9227 true Chr6: 29656969-29666195 Oryza sativa
LOC_Os06g48950 1.0kb downstream 1.0kb downstream 1000 false Chr6: 29665196-29666195 Oryza sativa
LOC_Os06g48950 2.0kb upstream 2.0kb upstream 10227 true Chr6: 29654969-29665195 Oryza sativa
LOC_Os06g48950 2.0kb upstream 2.0kb upstream 2000 false Chr6: 29654969-29656968 Oryza sativa
LOC_Os06g48950 2.0kb downstream 2.0kb downstream 10227 true Chr6: 29656969-29667195 Oryza sativa
LOC_Os06g48950 2.0kb downstream 2.0kb downstream 2000 false Chr6: 29665196-29667195 Oryza sativa
LOC_Os06g48950 5.0kb upstream 5.0kb upstream 13227 true Chr6: 29651969-29665195 Oryza sativa
LOC_Os06g48950 5.0kb upstream 5.0kb upstream 5000 false Chr6: 29651969-29656968 Oryza sativa
LOC_Os06g48950 5.0kb downstream 5.0kb downstream 13227 true Chr6: 29656969-29670195 Oryza sativa
LOC_Os06g48950 5.0kb downstream 5.0kb downstream 5000 false Chr6: 29665196-29670195 Oryza sativa
LOC_Os06g48950 10.0kb upstream 10.0kb upstream 18227 true Chr6: 29646969-29665195 Oryza sativa
LOC_Os06g48950 10.0kb upstream 10.0kb upstream 10000 false Chr6: 29646969-29656968 Oryza sativa
LOC_Os06g48950 10.0kb downstream 10.0kb downstream 18227 true Chr6: 29656969-29675195 Oryza sativa
LOC_Os06g48950 10.0kb downstream 10.0kb downstream 10000 false Chr6: 29665196-29675195 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578667 5269 Grass View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain