Gene : LOC_Os08g04180 O. sativa v7.0
Defline:  (1 of 1) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  265
Name:  ? LOC_Os08g04180 Secondary Identifier:  ? PAC:33104111
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-4161 Oryza sativa pathologic  
Osativa PWY-6949 Oryza sativa pathologic  
Osativa TRPSYN-PWY Oryza sativa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g04180 0.5kb upstream 0.5kb upstream 3949 true Chr8: 2029232-2033180 Oryza sativa
LOC_Os08g04180 0.5kb upstream 0.5kb upstream 500 false Chr8: 2029232-2029731 Oryza sativa
LOC_Os08g04180 0.5kb downstream 0.5kb downstream 3949 true Chr8: 2029732-2033680 Oryza sativa
LOC_Os08g04180 0.5kb downstream 0.5kb downstream 500 false Chr8: 2033181-2033680 Oryza sativa
LOC_Os08g04180 1.0kb upstream 1.0kb upstream 4449 true Chr8: 2028732-2033180 Oryza sativa
LOC_Os08g04180 1.0kb upstream 1.0kb upstream 1000 false Chr8: 2028732-2029731 Oryza sativa
LOC_Os08g04180 1.0kb downstream 1.0kb downstream 4449 true Chr8: 2029732-2034180 Oryza sativa
LOC_Os08g04180 1.0kb downstream 1.0kb downstream 1000 false Chr8: 2033181-2034180 Oryza sativa
LOC_Os08g04180 2.0kb upstream 2.0kb upstream 5449 true Chr8: 2027732-2033180 Oryza sativa
LOC_Os08g04180 2.0kb upstream 2.0kb upstream 2000 false Chr8: 2027732-2029731 Oryza sativa
LOC_Os08g04180 2.0kb downstream 2.0kb downstream 5449 true Chr8: 2029732-2035180 Oryza sativa
LOC_Os08g04180 2.0kb downstream 2.0kb downstream 2000 false Chr8: 2033181-2035180 Oryza sativa
LOC_Os08g04180 5.0kb upstream 5.0kb upstream 8449 true Chr8: 2024732-2033180 Oryza sativa
LOC_Os08g04180 5.0kb upstream 5.0kb upstream 5000 false Chr8: 2024732-2029731 Oryza sativa
LOC_Os08g04180 5.0kb downstream 5.0kb downstream 8449 true Chr8: 2029732-2038180 Oryza sativa
LOC_Os08g04180 5.0kb downstream 5.0kb downstream 5000 false Chr8: 2033181-2038180 Oryza sativa
LOC_Os08g04180 10.0kb upstream 10.0kb upstream 13449 true Chr8: 2019732-2033180 Oryza sativa
LOC_Os08g04180 10.0kb upstream 10.0kb upstream 10000 false Chr8: 2019732-2029731 Oryza sativa
LOC_Os08g04180 10.0kb downstream 10.0kb downstream 13449 true Chr8: 2029732-2043180 Oryza sativa
LOC_Os08g04180 10.0kb downstream 10.0kb downstream 10000 false Chr8: 2033181-2043180 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577172 5269 Grass View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain