Gene : LOC_Os08g05650 O. sativa v7.0
Defline:  (1 of 1) PTHR12358//PTHR12358:SF37 - SPHINGOSINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  373
Name:  ? LOC_Os08g05650 Secondary Identifier:  ? PAC:33107172
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-5129 Oryza sativa pathologic  
Osativa PWY-6483 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g05650 0.5kb upstream 0.5kb upstream 5192 true Chr8: 3016856-3022047 Oryza sativa
LOC_Os08g05650 0.5kb upstream 0.5kb upstream 500 false Chr8: 3016856-3017355 Oryza sativa
LOC_Os08g05650 0.5kb downstream 0.5kb downstream 5192 true Chr8: 3017356-3022547 Oryza sativa
LOC_Os08g05650 0.5kb downstream 0.5kb downstream 500 false Chr8: 3022048-3022547 Oryza sativa
LOC_Os08g05650 1.0kb upstream 1.0kb upstream 5692 true Chr8: 3016356-3022047 Oryza sativa
LOC_Os08g05650 1.0kb upstream 1.0kb upstream 1000 false Chr8: 3016356-3017355 Oryza sativa
LOC_Os08g05650 1.0kb downstream 1.0kb downstream 5692 true Chr8: 3017356-3023047 Oryza sativa
LOC_Os08g05650 1.0kb downstream 1.0kb downstream 1000 false Chr8: 3022048-3023047 Oryza sativa
LOC_Os08g05650 2.0kb upstream 2.0kb upstream 6692 true Chr8: 3015356-3022047 Oryza sativa
LOC_Os08g05650 2.0kb upstream 2.0kb upstream 2000 false Chr8: 3015356-3017355 Oryza sativa
LOC_Os08g05650 2.0kb downstream 2.0kb downstream 6692 true Chr8: 3017356-3024047 Oryza sativa
LOC_Os08g05650 2.0kb downstream 2.0kb downstream 2000 false Chr8: 3022048-3024047 Oryza sativa
LOC_Os08g05650 5.0kb upstream 5.0kb upstream 9692 true Chr8: 3012356-3022047 Oryza sativa
LOC_Os08g05650 5.0kb upstream 5.0kb upstream 5000 false Chr8: 3012356-3017355 Oryza sativa
LOC_Os08g05650 5.0kb downstream 5.0kb downstream 9692 true Chr8: 3017356-3027047 Oryza sativa
LOC_Os08g05650 5.0kb downstream 5.0kb downstream 5000 false Chr8: 3022048-3027047 Oryza sativa
LOC_Os08g05650 10.0kb upstream 10.0kb upstream 14692 true Chr8: 3007356-3022047 Oryza sativa
LOC_Os08g05650 10.0kb upstream 10.0kb upstream 10000 false Chr8: 3007356-3017355 Oryza sativa
LOC_Os08g05650 10.0kb downstream 10.0kb downstream 14692 true Chr8: 3017356-3032047 Oryza sativa
LOC_Os08g05650 10.0kb downstream 10.0kb downstream 10000 false Chr8: 3022048-3032047 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583970 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain