Gene : LOC_Os08g23110 O. sativa v7.0
Defline:  (1 of 3) PTHR11946:SF53 - TYROSINE-TRNA LIGASE Genomic Order:  1357
Name:  ? LOC_Os08g23110 Secondary Identifier:  ? PAC:33102776
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa TRNA-CHARGING-PWY Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g23110 0.5kb upstream 0.5kb upstream 6293 true Chr8: 13919425-13925717 Oryza sativa
LOC_Os08g23110 0.5kb upstream 0.5kb upstream 500 false Chr8: 13919425-13919924 Oryza sativa
LOC_Os08g23110 0.5kb downstream 0.5kb downstream 6293 true Chr8: 13919925-13926217 Oryza sativa
LOC_Os08g23110 0.5kb downstream 0.5kb downstream 500 false Chr8: 13925718-13926217 Oryza sativa
LOC_Os08g23110 1.0kb upstream 1.0kb upstream 6793 true Chr8: 13918925-13925717 Oryza sativa
LOC_Os08g23110 1.0kb upstream 1.0kb upstream 1000 false Chr8: 13918925-13919924 Oryza sativa
LOC_Os08g23110 1.0kb downstream 1.0kb downstream 6793 true Chr8: 13919925-13926717 Oryza sativa
LOC_Os08g23110 1.0kb downstream 1.0kb downstream 1000 false Chr8: 13925718-13926717 Oryza sativa
LOC_Os08g23110 2.0kb upstream 2.0kb upstream 7793 true Chr8: 13917925-13925717 Oryza sativa
LOC_Os08g23110 2.0kb upstream 2.0kb upstream 2000 false Chr8: 13917925-13919924 Oryza sativa
LOC_Os08g23110 2.0kb downstream 2.0kb downstream 7793 true Chr8: 13919925-13927717 Oryza sativa
LOC_Os08g23110 2.0kb downstream 2.0kb downstream 2000 false Chr8: 13925718-13927717 Oryza sativa
LOC_Os08g23110 5.0kb upstream 5.0kb upstream 10793 true Chr8: 13914925-13925717 Oryza sativa
LOC_Os08g23110 5.0kb upstream 5.0kb upstream 5000 false Chr8: 13914925-13919924 Oryza sativa
LOC_Os08g23110 5.0kb downstream 5.0kb downstream 10793 true Chr8: 13919925-13930717 Oryza sativa
LOC_Os08g23110 5.0kb downstream 5.0kb downstream 5000 false Chr8: 13925718-13930717 Oryza sativa
LOC_Os08g23110 10.0kb upstream 10.0kb upstream 15793 true Chr8: 13909925-13925717 Oryza sativa
LOC_Os08g23110 10.0kb upstream 10.0kb upstream 10000 false Chr8: 13909925-13919924 Oryza sativa
LOC_Os08g23110 10.0kb downstream 10.0kb downstream 15793 true Chr8: 13919925-13935717 Oryza sativa
LOC_Os08g23110 10.0kb downstream 10.0kb downstream 10000 false Chr8: 13925718-13935717 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
124589437 5269 Grass View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain