Gene : LOC_Os08g35420 O. sativa v7.0
Defline:  (1 of 3) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  2190
Name:  ? LOC_Os08g35420 Secondary Identifier:  ? PAC:33106537
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PHOTOALL-PWY Oryza sativa pathologic  
Osativa PWY-101 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g35420 0.5kb upstream 0.5kb upstream 1606 true Chr8: 22324088-22325693 Oryza sativa
LOC_Os08g35420 0.5kb upstream 0.5kb upstream 500 false Chr8: 22324088-22324587 Oryza sativa
LOC_Os08g35420 0.5kb downstream 0.5kb downstream 1606 true Chr8: 22324588-22326193 Oryza sativa
LOC_Os08g35420 0.5kb downstream 0.5kb downstream 500 false Chr8: 22325694-22326193 Oryza sativa
LOC_Os08g35420 1.0kb upstream 1.0kb upstream 2106 true Chr8: 22323588-22325693 Oryza sativa
LOC_Os08g35420 1.0kb upstream 1.0kb upstream 1000 false Chr8: 22323588-22324587 Oryza sativa
LOC_Os08g35420 1.0kb downstream 1.0kb downstream 2106 true Chr8: 22324588-22326693 Oryza sativa
LOC_Os08g35420 1.0kb downstream 1.0kb downstream 1000 false Chr8: 22325694-22326693 Oryza sativa
LOC_Os08g35420 2.0kb upstream 2.0kb upstream 3106 true Chr8: 22322588-22325693 Oryza sativa
LOC_Os08g35420 2.0kb upstream 2.0kb upstream 2000 false Chr8: 22322588-22324587 Oryza sativa
LOC_Os08g35420 2.0kb downstream 2.0kb downstream 3106 true Chr8: 22324588-22327693 Oryza sativa
LOC_Os08g35420 2.0kb downstream 2.0kb downstream 2000 false Chr8: 22325694-22327693 Oryza sativa
LOC_Os08g35420 5.0kb upstream 5.0kb upstream 6106 true Chr8: 22319588-22325693 Oryza sativa
LOC_Os08g35420 5.0kb upstream 5.0kb upstream 5000 false Chr8: 22319588-22324587 Oryza sativa
LOC_Os08g35420 5.0kb downstream 5.0kb downstream 6106 true Chr8: 22324588-22330693 Oryza sativa
LOC_Os08g35420 5.0kb downstream 5.0kb downstream 5000 false Chr8: 22325694-22330693 Oryza sativa
LOC_Os08g35420 10.0kb upstream 10.0kb upstream 11106 true Chr8: 22314588-22325693 Oryza sativa
LOC_Os08g35420 10.0kb upstream 10.0kb upstream 10000 false Chr8: 22314588-22324587 Oryza sativa
LOC_Os08g35420 10.0kb downstream 10.0kb downstream 11106 true Chr8: 22324588-22335693 Oryza sativa
LOC_Os08g35420 10.0kb downstream 10.0kb downstream 10000 false Chr8: 22325694-22335693 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586576 5269 Grass View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain