Gene : LOC_Os08g39840 O. sativa v7.0
Defline:  (1 of 2) PTHR11771//PTHR11771:SF42 - LIPOXYGENASE // PROTEIN C13C4.7 Genomic Order:  2551
Name:  ? LOC_Os08g39840 Secondary Identifier:  ? PAC:33103305
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Osativa PWY-5409 Oryza sativa pathologic  
Osativa PWY-735 Oryza sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g39840 0.5kb upstream 0.5kb upstream 8218 true Chr8: 25216363-25224580 Oryza sativa
LOC_Os08g39840 0.5kb upstream 0.5kb upstream 500 false Chr8: 25224081-25224580 Oryza sativa
LOC_Os08g39840 0.5kb downstream 0.5kb downstream 8218 true Chr8: 25215863-25224080 Oryza sativa
LOC_Os08g39840 0.5kb downstream 0.5kb downstream 500 false Chr8: 25215863-25216362 Oryza sativa
LOC_Os08g39840 1.0kb upstream 1.0kb upstream 8718 true Chr8: 25216363-25225080 Oryza sativa
LOC_Os08g39840 1.0kb upstream 1.0kb upstream 1000 false Chr8: 25224081-25225080 Oryza sativa
LOC_Os08g39840 1.0kb downstream 1.0kb downstream 8718 true Chr8: 25215363-25224080 Oryza sativa
LOC_Os08g39840 1.0kb downstream 1.0kb downstream 1000 false Chr8: 25215363-25216362 Oryza sativa
LOC_Os08g39840 2.0kb upstream 2.0kb upstream 9718 true Chr8: 25216363-25226080 Oryza sativa
LOC_Os08g39840 2.0kb upstream 2.0kb upstream 2000 false Chr8: 25224081-25226080 Oryza sativa
LOC_Os08g39840 2.0kb downstream 2.0kb downstream 9718 true Chr8: 25214363-25224080 Oryza sativa
LOC_Os08g39840 2.0kb downstream 2.0kb downstream 2000 false Chr8: 25214363-25216362 Oryza sativa
LOC_Os08g39840 5.0kb upstream 5.0kb upstream 12718 true Chr8: 25216363-25229080 Oryza sativa
LOC_Os08g39840 5.0kb upstream 5.0kb upstream 5000 false Chr8: 25224081-25229080 Oryza sativa
LOC_Os08g39840 5.0kb downstream 5.0kb downstream 12718 true Chr8: 25211363-25224080 Oryza sativa
LOC_Os08g39840 5.0kb downstream 5.0kb downstream 5000 false Chr8: 25211363-25216362 Oryza sativa
LOC_Os08g39840 10.0kb upstream 10.0kb upstream 17718 true Chr8: 25216363-25234080 Oryza sativa
LOC_Os08g39840 10.0kb upstream 10.0kb upstream 10000 false Chr8: 25224081-25234080 Oryza sativa
LOC_Os08g39840 10.0kb downstream 10.0kb downstream 17718 true Chr8: 25206363-25224080 Oryza sativa
LOC_Os08g39840 10.0kb downstream 10.0kb downstream 10000 false Chr8: 25206363-25216362 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121991959 5273 Angiosperm View MSA
124567576 5269 Grass View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain