Gene : LOC_Os08g40900 O. sativa v7.0
Defline:  (1 of 14) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  2637
Name:  ? LOC_Os08g40900 Secondary Identifier:  ? PAC:33107031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
LOC_Os08g40900 0.5kb upstream 0.5kb upstream 7469 true Chr8: 25870712-25878180 Oryza sativa
LOC_Os08g40900 0.5kb upstream 0.5kb upstream 500 false Chr8: 25877681-25878180 Oryza sativa
LOC_Os08g40900 0.5kb downstream 0.5kb downstream 7469 true Chr8: 25870212-25877680 Oryza sativa
LOC_Os08g40900 0.5kb downstream 0.5kb downstream 500 false Chr8: 25870212-25870711 Oryza sativa
LOC_Os08g40900 1.0kb upstream 1.0kb upstream 7969 true Chr8: 25870712-25878680 Oryza sativa
LOC_Os08g40900 1.0kb upstream 1.0kb upstream 1000 false Chr8: 25877681-25878680 Oryza sativa
LOC_Os08g40900 1.0kb downstream 1.0kb downstream 7969 true Chr8: 25869712-25877680 Oryza sativa
LOC_Os08g40900 1.0kb downstream 1.0kb downstream 1000 false Chr8: 25869712-25870711 Oryza sativa
LOC_Os08g40900 2.0kb upstream 2.0kb upstream 8969 true Chr8: 25870712-25879680 Oryza sativa
LOC_Os08g40900 2.0kb upstream 2.0kb upstream 2000 false Chr8: 25877681-25879680 Oryza sativa
LOC_Os08g40900 2.0kb downstream 2.0kb downstream 8969 true Chr8: 25868712-25877680 Oryza sativa
LOC_Os08g40900 2.0kb downstream 2.0kb downstream 2000 false Chr8: 25868712-25870711 Oryza sativa
LOC_Os08g40900 5.0kb upstream 5.0kb upstream 11969 true Chr8: 25870712-25882680 Oryza sativa
LOC_Os08g40900 5.0kb upstream 5.0kb upstream 5000 false Chr8: 25877681-25882680 Oryza sativa
LOC_Os08g40900 5.0kb downstream 5.0kb downstream 11969 true Chr8: 25865712-25877680 Oryza sativa
LOC_Os08g40900 5.0kb downstream 5.0kb downstream 5000 false Chr8: 25865712-25870711 Oryza sativa
LOC_Os08g40900 10.0kb upstream 10.0kb upstream 16969 true Chr8: 25870712-25887680 Oryza sativa
LOC_Os08g40900 10.0kb upstream 10.0kb upstream 10000 false Chr8: 25877681-25887680 Oryza sativa
LOC_Os08g40900 10.0kb downstream 10.0kb downstream 16969 true Chr8: 25860712-25877680 Oryza sativa
LOC_Os08g40900 10.0kb downstream 10.0kb downstream 10000 false Chr8: 25860712-25870711 Oryza sativa

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574948 5269 Grass View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain