Protein Domain : IPR007641

Type:  Domain Name:  RNA polymerase Rpb2, domain 7
Description:  RNA polymerases catalyse the DNA-dependent polymerisation of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial and chloroplast polymerases). Rpb2 is the second largest subunit of the RNA polymerase. This domain comprised of the structural domains anchor and clamp. The clamp region (C-terminal) contains a zinc-binding motif. The clamp region is named due to its interaction with the clamp domain found in Rpb1. The domain also contains a region termed switch 4. The switches within the polymerase are thought to signal different stages of transcription []. Short Name:  RNA_pol_Rpb2_7
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0 Child Features

0 Contains

1 Cross References

Identifier
PF04560

3 Found Ins

DB identifier Type Name
IPR015712 Family DNA-directed RNA polymerase, subunit 2
IPR010243 Family DNA-directed RNA polymerase, beta subunit
IPR019969 Family DNA-directed RNA polymerase subunit B (Rpo2)

3 GO Annotations

GO Term Gene Name
GO:0003677 IPR007641
GO:0003899 IPR007641
GO:0006351 IPR007641

3 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR007641
GO:0003899 IPR007641
GO:0006351 IPR007641

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
92553 PAC:15419202 Selaginella moellendorffii 617  
236845 PAC:15412131 Selaginella moellendorffii 1069  
148107 D8RLN5 PAC:15405344 Selaginella moellendorffii 1178  
101823 D8RUX1 PAC:15406172 Selaginella moellendorffii 692  
405033 D8QY62 PAC:15410045 Selaginella moellendorffii 1126  
443461 D8S1N7 PAC:15413877 Selaginella moellendorffii 1386  
118653 D8SKA2 PAC:15410128 Selaginella moellendorffii 762  
237023 PAC:15408828 Selaginella moellendorffii 1069  
237024 PAC:15408829 Selaginella moellendorffii 1031  
237022 PAC:15408826 Selaginella moellendorffii 1069  
evm.TU.contig_45563.1 PAC:16432196 Carica papaya 105  
evm.model.supercontig_127.33 PAC:16407396 Carica papaya 1117  
29848.m004540 B9RNV9 PAC:16811196 Ricinus communis 1203  
29851.m002412 B9RZ91 PAC:16811439 Ricinus communis 1194  
30040.m000275 B9SVH7 PAC:16816021 Ricinus communis 1159  
29686.m000857 B9SHS2 PAC:16805768 Ricinus communis 1139  
Cucsa.355360.1 PAC:16980185 Cucumis sativus 96  
Cucsa.046200.1 PAC:16953485 Cucumis sativus 1199  
Cucsa.005050.1 PAC:16951065 Cucumis sativus 1173  
Cucsa.271520.1 A0A0A0L319 PAC:16973540 Cucumis sativus 1197  
Cucsa.361180.2 PAC:16980870 Cucumis sativus 868  
Cucsa.361180.1 PAC:16980869 Cucumis sativus 1163  
orange1.1g019610m A0A067FVH4 PAC:18109111 Citrus sinensis 338  
orange1.1g014847m A0A067FW66 PAC:18109110 Citrus sinensis 417  
orange1.1g014858m A0A067FW66 PAC:18109109 Citrus sinensis 417  
orange1.1g001050m A0A067EB52 PAC:18098268 Citrus sinensis 1173  
orange1.1g001125m PAC:18129243 Citrus sinensis 1149  
orange1.1g001124m PAC:18129242 Citrus sinensis 1149  
orange1.1g001092m PAC:18129241 Citrus sinensis 1159  
orange1.1g001021m A0A067DRM8 PAC:18124521 Citrus sinensis 1186  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11313498