Protein Domain : IPR006773

Type:  Family Name:  26S proteasome complex ubiquitin receptor, subunit Rpn13
Description:  This family was thought originally to be involved in cell-adhesion [, ], but the members are now known to be proteasome subunit Rpn13, a novel ubiquitin receptor. The 26S proteasome is a huge macromolecular protein-degradation machine consisting of a proteolytically active 20S core, in the form of four disc-like proteins, and one or two 19S regulatory particles. The regulatory particle(s) sit on the top and or bottom of the core, de-ubiquitinate the substrate peptides, unfold them and guide them into the narrow channel through the centre of the core. Rpn13 and its homologues dock onto the regulatory particle through the N-terminal region which binds Rpn2. The C-terminal part of the domain binds de-ubiquitinating enzyme Uch37/UCHL5 and enhances its isopeptidase activity. Rpn13 binds ubiquitin via a conserved amino-terminal region called the pleckstrin-like receptor for ubiquitin, termed Pru, domain []. The domain forms two contiguous anti-parallel beta-sheets with a configuration similar to the pleckstrin-homology domain (PHD) fold []. Rpn13's ability to bind ubiquitin and the proteasome subunit Rpn2/S1 simultaneously supports evidence of its role as a ubiquitin receptor. Finally, when complexed to di-ubiquitin, via the Pru, and Uch37 via the C-terminal part, it frees up the distal ubiquitin for de-ubiquitination by the Uch37 []. Short Name:  26S_Psome_Ubiquitin-recp_Rpn13

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PTHR12225
PF04683

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0005634 IPR006773
GO:0005737 IPR006773

2 Ontology Annotations

GO Term Gene Name
GO:0005634 IPR006773
GO:0005737 IPR006773

0 Parent Features

596 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
92998 D8RG69 PAC:15422246 Selaginella moellendorffii 290  
evm.model.supercontig_115.19 PAC:16406181 Carica papaya 326  
30018.m000552 B9SAC2 PAC:16815703 Ricinus communis 557  
Cucsa.178980.1 PAC:16967184 Cucumis sativus 303  
orange1.1g028289m A0A067F3V7 PAC:18105372 Citrus sinensis 211  
orange1.1g027497m A0A067F3S7 PAC:18105371 Citrus sinensis 222  
orange1.1g028274m A0A067F3V7 PAC:18105373 Citrus sinensis 211  
orange1.1g020703m A0A067FEZ5 PAC:18105366 Citrus sinensis 322  
orange1.1g021326m A0A067F3S0 PAC:18105368 Citrus sinensis 314  
orange1.1g021212m A0A067F3V0 PAC:18105367 Citrus sinensis 316  
orange1.1g023646m A0A067F7B1 PAC:18105369 Citrus sinensis 279  
orange1.1g026728m A0A067FFP6 PAC:18105370 Citrus sinensis 234  
AT2G26590.3 O48726 PAC:19639038 Arabidopsis thaliana 300  
AT2G26590.2 O48726 PAC:19639037 Arabidopsis thaliana 300  
AT2G26590.1 O48726 PAC:19639036 Arabidopsis thaliana 300  
Thhalv10016855m V4M5A6 PAC:20181001 Eutrema salsugineum 359  
Thhalv10000977m V4KPF3 PAC:20202706 Eutrema salsugineum 293  
Ciclev10008923m V4UQ41 PAC:20792786 Citrus clementina 322  
Ciclev10008970m V4WI59 PAC:20792787 Citrus clementina 314  
Lus10040571 PAC:23157666 Linum usitatissimum 303  
Lus10021598 PAC:23182104 Linum usitatissimum 354  
Potri.T041400.1 A0A2K1R8V2 PAC:27051353 Populus trichocarpa 158  
Potri.003G013100.1 A0A2K2AZX9 PAC:26997005 Populus trichocarpa 172  
Potri.003G027800.4 PAC:26996478 Populus trichocarpa 160  
Potri.003G027800.3 PAC:26996477 Populus trichocarpa 223  
Potri.003G027800.1 PAC:26996475 Populus trichocarpa 255  
Potri.003G027800.2 PAC:26996476 Populus trichocarpa 248  
Potri.003G028500.3 U7E139 PAC:26998278 Populus trichocarpa 69  
Potri.003G028500.2 U7E139 PAC:26998277 Populus trichocarpa 69  
Potri.003G028500.1 U7DZ46 PAC:26998276 Populus trichocarpa 97  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10610020
            10919708
            18497827
            18497817