Protein Domain : IPR004312

Type:  Family Name:  Arabidopsis retrotransposon Orf1
Description:  ATHILA is a group of Arabidopsis thalianaretrotransposons [] belonging to the Ty3/gypsy family of the long terminalrepeat (LTR) class of eukaryotic retrotransposons[, ]. The central region of ATHILA retrotransposons contains two orthree open reading frames (ORFs). This family represents the ORF1 product. The function of ORF1 is unknown. Short Name:  ATHILA_Orf1
Paste the following link

0 Child Features

0 Contains

1 Cross References

Identifier
PF03078

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

406 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
AT3G30820.1 F4J7V3 PAC:19660923 Arabidopsis thaliana 405  
AT3G44570.1 F4J349 PAC:19659015 Arabidopsis thaliana 177  
AT2G14000.1 Q9ZPT9 PAC:19639170 Arabidopsis thaliana 346  
Lus10012088 PAC:23146020 Linum usitatissimum 273  
Thecc1EG003379t1 A0A061DPY3 PAC:27434320 Theobroma cacao 483  
Thecc1EG018529t1 A0A061EEU2 PAC:27454319 Theobroma cacao 429  
LOC_Os01g29507.1 PAC:33126381 Oryza sativa 647  
LOC_Os11g08889.1 PAC:33160407 Oryza sativa 385  
LOC_Os11g08729.1 PAC:33162775 Oryza sativa 385  
LOC_Os04g10080.1 PAC:33112479 Oryza sativa 416  
LOC_Os04g13080.1 PAC:33108456 Oryza sativa 604  
AL1G32780.t1 PAC:35935667 Arabidopsis lyrata 509  
AL1G51290.t1 PAC:35934332 Arabidopsis lyrata 156  
AL126U10020.t1 PAC:35930103 Arabidopsis lyrata 542  
AL2G19060.t1 PAC:35947154 Arabidopsis lyrata 403  
AL2G32670.t1 PAC:35946159 Arabidopsis lyrata 509  
AL3G34330.t1 PAC:35943429 Arabidopsis lyrata 498  
AL3G44170.t1 PAC:35941122 Arabidopsis lyrata 357  
AL5G19800.t1 PAC:35920945 Arabidopsis lyrata 195  
AL5G19990.t1 PAC:35919894 Arabidopsis lyrata 448  
AL7G49440.t1 PAC:35937494 Arabidopsis lyrata 402  
AL9U11180.t1 PAC:35925548 Arabidopsis lyrata 427  
Tp57577_TGAC_v2_mRNA21206 PAC:35983265 Trifolium pratense 182  
Tp57577_TGAC_v2_mRNA37319 PAC:35985285 Trifolium pratense 270  
Tp57577_TGAC_v2_mRNA23125 PAC:35991027 Trifolium pratense 620  
Tp57577_TGAC_v2_mRNA15003 A0A2K3MXC2 PAC:35959589 Trifolium pratense 394  
Tp57577_TGAC_v2_mRNA14523 PAC:35954886 Trifolium pratense 358  
Tp57577_TGAC_v2_mRNA30274 PAC:35953671 Trifolium pratense 451  
AUR62026149-RA PAC:36296680 Chenopodium quinoa 199  
AUR62006489-RA PAC:36302663 Chenopodium quinoa 107  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8534844
            9611185
            10889217