Protein Domain : IPR006765

Type:  Family Name:  Polyketide synthesis cyclase
Description:  Aromatic polyketides are assembled by a type II (iterative) polyketide synthases (PKSs) in bacteria. Type II PKS complexes consist of several monofunctional or bifunctional proteins which produce polyketide chains of variable but defined length from a specific starter unit and a number of extender units. They also specify the initial regiospecific folding and cyclization pattern of nascent polyketides either through the action of a cyclase (CYC) subunit or through the combined action of site-specific ketoreductase and CYC subunits [, ]. This family represents a number of cyclases involved in polyketide synthesis in a number of actinobacterial species.Tetracenomycin F2 cyclase (TcmI) catalyses an aromatic rearrangement in the biosynthetic pathaway of tetracenomycin C from Streptomyces glaucescens. The protein is a homodimer where each subunit forms a beta-alpha-beta fold belonging to the ferrodoxin fold superfamily []. Four strands of antiparallel sheets and a layer of alpha helices create a cavity which was proposed to be the active site. This structure shows strong topological similarity to a polyketide monoxygenase () from S. coelicolor which functions in the actinorhodin biosynthesic pathway []. It was suggested, therefore, that this fold is well suited to serve as a framework for rearrangements and chemical modification of polyaromatic substrates. Short Name:  Polyketide_synth_cyclase

0 Child Features

1 Contains

DB identifier Type Name
IPR011008 Domain Dimeric alpha-beta barrel

3 Cross Referencess

Identifier
PF04673
PD012644
G3DSA:3.30.70.1090

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0030639 IPR006765

1 Ontology Annotations

GO Term Gene Name
GO:0030639 IPR006765

0 Parent Features

88 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
AT3G11745.1 Q56XW9 PAC:19665109 Arabidopsis thaliana 90  
Gorai.012G083800.1 A0A0D2V3U6 PAC:26828675 Gossypium raimondii 640  
Gorai.007G066900.4 A0A0D2P441 PAC:26779954 Gossypium raimondii 732  
Gorai.007G066900.5 A0A0D2SF76 PAC:26779955 Gossypium raimondii 721  
Gorai.007G066900.2 A0A0D2QMJ8 PAC:26779951 Gossypium raimondii 854  
Gorai.007G066900.3 A0A0D2S897 PAC:26779953 Gossypium raimondii 803  
Gorai.007G066900.6 A0A0D2TA64 PAC:26779952 Gossypium raimondii 809  
Gorai.007G066900.1 A0A0D2TA25 PAC:26779950 Gossypium raimondii 917  
Thecc1EG001582t1 A0A061DKW3 PAC:27433561 Theobroma cacao 923  
Thecc1EG001582t2 A0A061DJZ8 PAC:27433562 Theobroma cacao 856  
Thecc1EG001582t3 A0A061DRX1 PAC:27433563 Theobroma cacao 768  
Brara.I00757.1.p A0A397Y1P7 PAC:30645377 Brassica rapa FPsc 908  
Cre12.g543301.t1.1 A0A2K3D6R1 PAC:30793366 Chlamydomonas reinhardtii 1749  
Eucgr.I00112.3.p A0A059AJW6 PAC:32062574 Eucalyptus grandis 930  
Eucgr.I00112.4.p A0A059AJW6 PAC:32062575 Eucalyptus grandis 930  
Eucgr.I00112.5.p A0A059AJW6 PAC:32062576 Eucalyptus grandis 930  
Eucgr.I00112.6.p A0A059AJW6 PAC:32062577 Eucalyptus grandis 930  
Eucgr.I00112.1.p A0A059AJW6 PAC:32062572 Eucalyptus grandis 930  
Eucgr.I00112.2.p A0A059AJW6 PAC:32062573 Eucalyptus grandis 930  
GSMUA_Achr1P22850_001 PAC:32312389 Musa acuminata 596  
Brdisv20Bd21Ref1015820m.p PAC:33430663 Brachypodium distachyon Bd21 AnntCtrl 72  
Brdisv1pangenome1029089m.p PAC:33616813 Brachypodium distachyon Pangenome 72  
Tp57577_TGAC_v2_mRNA34717 PAC:35975026 Trifolium pratense 649  
Tp57577_TGAC_v2_mRNA1734 PAC:35989234 Trifolium pratense 195  
Oropetium_20150105_25976A PAC:36018343 Oropetium thomaeum 224  
Oropetium_20150105_13737A PAC:35998828 Oropetium thomaeum 221  
Solyc05g016190.2.1 PAC:36146529 Solanum lycopersicum 62  
Phvul.009G153400.1.p V7AZU6 PAC:37149899 Phaseolus vulgaris 917  
AT3G11745.1 Q56XW9 PAC:37412991 Arabidopsis thaliana 90  
Pavir.5KG539900.1.p PAC:37632890 Panicum virgatum 102  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12514126
            15231835
            19903160
            9224566