Protein Domain : IPR005798

Type:  Domain Name:  Cytochrome b/b6, C-terminal
Description:  In the mitochondrion of eukaryotes and in aerobic prokaryotes, cytochrome b is a component of respiratory chain complex III () - also known as the bc1 complex or ubiquinol-cytochrome c reductase. In plant chloroplasts and cyanobacteria, there is a analogous protein, cytochrome b6, a component of the plastoquinone-plastocyanin reductase (), also known as the b6f complex.Cytochrome b/b6 [, ] is an integral membrane protein of approximately 400 amino acid residues that probably has 8 transmembrane segments. In plants and cyanobacteria, cytochrome b6 consists of two subunits encoded by the petB and petD genes. The sequence of petB is colinear with the N-terminal part of mitochondrial cytochrome b, while petD corresponds to the C-terminal part.Cytochrome b/b6 non-covalently binds two haem groups, known as b562 and b566. Four conserved histidine residues are postulated to be the ligands of the iron atoms of these two haem groups.Apart from regions around some of the histidine haem ligands, there are a few conserved regions in the sequence of b/b6. The best conserved of these regions includes an invariant P-E-W triplet which lies in the loop that separates the fifth and sixth transmembrane segments. It seems to be important for electron transfer at the ubiquinone redox site - called Qz or Qo (where o stands for outside) - located on the outer side of the membrane. This entry is the C terminus of these proteins. Short Name:  Cyt_b/b6_C

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF00032
PS51003
SSF81648

2 Found Ins

DB identifier Type Name
IPR005870 Family Cytochrome b6/f complex, subunit IV
IPR012049 Family Menaquinone:cytochrome c reductase, cytochrome b/c subunit

3 GO Annotations

GO Term Gene Name
GO:0009055 IPR005798
GO:0016491 IPR005798
GO:0016020 IPR005798

3 Ontology Annotations

GO Term Gene Name
GO:0009055 IPR005798
GO:0016491 IPR005798
GO:0016020 IPR005798

0 Parent Features

996 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
137742 D8TEA0 PAC:15422201 Selaginella moellendorffii 211  
44144.m000044 PAC:16827666 Ricinus communis 125  
45011.m000028 PAC:16827763 Ricinus communis 125  
Cucsa.354360.1 PAC:16980180 Cucumis sativus 98  
ATCG00730.1 P56774 PAC:19638026 Arabidopsis thaliana 160  
ATMG00220.1 PAC:19643621 Arabidopsis thaliana 393  
AT2G07727.1 PAC:19641704 Arabidopsis thaliana 393  
Thhalv10001270m V4L773 PAC:20208999 Eutrema salsugineum 393  
Ciclev10003610m V4SY52 PAC:20788055 Citrus clementina 182  
Potri.005G113800.1 A0A2K2AFC1 PAC:27029803 Populus trichocarpa 212  
Potri.006G064400.1 A0A2K1ZXU8 PAC:27005642 Populus trichocarpa 363  
Potri.011G074600.1 A0A2K1YGV5 PAC:27002476 Populus trichocarpa 152  
Potri.013G136800.1 A0A2K1Y5F5 PAC:26993478 Populus trichocarpa 106  
Potri.013G088900.1 A0A2K1Y374 PAC:26994063 Populus trichocarpa 141  
Gorai.001G162000.1 A0A0D2PSA8 PAC:26819541 Gossypium raimondii 392  
Gorai.001G191300.1 A0A0D2QSN2 PAC:26824533 Gossypium raimondii 79  
Gorai.002G089800.1 A0A0D2Q9X0 PAC:26794531 Gossypium raimondii 154  
Gorai.004G123400.1 A0A0D2QWJ2 PAC:26773659 Gossypium raimondii 58  
Gorai.004G150600.1 A0A0D2MR38 PAC:26774374 Gossypium raimondii 60  
Gorai.009G350200.1 A0A0D2U070 PAC:26765105 Gossypium raimondii 113  
Gorai.007G064400.1 A0A0D2P3Z0 PAC:26778096 Gossypium raimondii 118  
21174 PAC:27391869 Coccomyxa subellipsoidea C-169 400  
44239 C1MRG4 PAC:27346726 Micromonas pusilla CCMP1545 159  
106769 C1E096 PAC:27396646 Micromonas sp RCC299 160  
32458 A4RZP4 PAC:27414375 Ostreococcus lucimarinus 213  
Thecc1EG046401t1 PAC:27459550 Theobroma cacao 139  
Migut.D01433.1.p PAC:28929433 Mimulus guttatus 174  
Migut.D01367.1.p PAC:28928296 Mimulus guttatus 74  
Migut.G01341.1.p PAC:28943858 Mimulus guttatus 125  
Cagra.5120s0021.1.p PAC:28904246 Capsella grandiflora 395  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8329437
            2509716