Protein Domain : IPR005732

Type:  Family Name:  Ribosomal protein S19, bacterial-type
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].The small ribosomal subunit protein S19 contains 88-144 amino acid residues. In Escherichia coli, S19 is known to form a complex with S13 that binds strongly to 16S ribosomal RNA. Experimental evidence [] has revealed that S19 is moderately exposed on the ribosomal surface. Short Name:  Ribosomal_S19_bac-type

0 Child Features

1 Contains

DB identifier Type Name
IPR020934 Conserved_site Ribosomal protein S19 conserved site

1 Cross References

Identifier
TIGR01050

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0003735 IPR005732
GO:0006412 IPR005732
GO:0015935 IPR005732

3 Ontology Annotations

GO Term Gene Name
GO:0003735 IPR005732
GO:0006412 IPR005732
GO:0015935 IPR005732

1 Parent Features

DB identifier Type Name
IPR002222 Family Ribosomal protein S19/S15

608 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
137793 D8TEA8 PAC:15422341 Selaginella moellendorffii 99  
80593 D8QXV7 PAC:15406209 Selaginella moellendorffii 99  
Cucsa.169620.1 PAC:16966412 Cucumis sativus 83  
Cucsa.162920.1 PAC:16965756 Cucumis sativus 87  
AT5G47320.1 P39697 PAC:19665947 Arabidopsis thaliana 212  
ATCG00820.1 PAC:19637961 Arabidopsis thaliana 92  
Thhalv10002665m V4KHG1 PAC:20196199 Eutrema salsugineum 210  
Ciclev10002977m V4TCI6 PAC:20785608 Citrus clementina 88  
Lus10027711 PAC:23151251 Linum usitatissimum 125  
Lus10003009 PAC:23176141 Linum usitatissimum 961  
Potri.011G074200.1 PAC:27002379 Populus trichocarpa 258  
Gorai.004G123300.1 A0A0D2PAV1 PAC:26773791 Gossypium raimondii 80  
Araha.11756s0203.1.p PAC:28856296 Arabidopsis halleri 92  
Araha.49072s0003.1.p PAC:28847042 Arabidopsis halleri 216  
Cagra.3675s0001.1.p PAC:28900859 Capsella grandiflora 211  
Brara.A02612.1.p A0A398AQA1 PAC:30640305 Brassica rapa FPsc 207  
Brara.C03925.1.p A0A398A3L3 PAC:30616441 Brassica rapa FPsc 170  
Brara.G00698.1.p A0A397YIL0 PAC:30632809 Brassica rapa FPsc 206  
Bostr.14419s0038.1.p PAC:30675988 Boechera stricta 210  
Cre08.g375250.t1.1 A0A2K3DHN0 PAC:30774094 Chlamydomonas reinhardtii 116  
Bradi4g19721.1.p PAC:31139383 Brachypodium distachyon 93  
Bradi5g10962.2.p PAC:31145600 Brachypodium distachyon 93  
Bradi1g05792.1.p PAC:31131784 Brachypodium distachyon 93  
Bradi3g18412.1.p PAC:31154374 Brachypodium distachyon 93  
Medtr3g035720.1 PAC:31060474 Medicago truncatula 92  
Medtr4g051420.1 PAC:31106756 Medicago truncatula 92  
Medtr0002s0800.1 PAC:31084747 Medicago truncatula 216  
Medtr0002s0360.1 PAC:31084757 Medicago truncatula 216  
Spipo0G0144900 PAC:31508029 Spirodela polyrhiza 92  
Spipo15G0006900 PAC:31507354 Spirodela polyrhiza 95  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498
            9371771