Protein Domain : IPR005867

Type:  Family Name:  Photosystem II protein D1
Description:  Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product.PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the D1 protein (also known as PsbA), which forms the reaction core of PSII as a heterodimer with the D2 protein. In higher plants, the N-terminal residues of both proteins, which are exposed to the stromal surface, can be reversibly phosphorylated. After insertion in the membrane, the C-terminal of the D1 protein is cleaved by a C-terminal processing protease to yield the mature protein []. This processing is essential for the assembly of a functional 4-atom manganese cluster, which involves binding to a highly conserved C-terminal alanine 344 []. The Mn cluster is located on the lumenal surface of the D1 and D2 proteins []. In addition to the Mn cluster, the D1/D2 core binds to a number of cofactors, including: two pheophytin molecules, only one of which is phytochemically active; non-haem iron; and two quinones, Qa (bound to D2) and Qb (bound to D1). Upon light excitation, an electron is transferred from the primary donor (chlorophyll a) via intermediate acceptor pheophytin to the primary quinone Qa, then to the secondary quinone Qb. At the oxidising side of PSII, a redox-active residue in the D1 protein reduces P680, the oxidised tyrosine then withdrawing electrons from a manganese cluster, which in turn withdraw electrons from water, leading to the splitting of water and the formation of molecular oxygen. PSII thus provides a source of electrons that can be used by photosystem I to produce the reducing power (NADPH) required to convert CO2 to glucose. Short Name:  PSII_D1

0 Child Features

0 Contains

2 Cross Referencess

Identifier
TIGR01151
MF_01379

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0009055 IPR005867

1 Ontology Annotations

GO Term Gene Name
GO:0009055 IPR005867

1 Parent Features

DB identifier Type Name
IPR000484 Family Photosynthetic reaction centre, L/M

267 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
236852 C7B2F5 PAC:15412152 Selaginella moellendorffii 353  
evm.TU.contig_40297.1 PAC:16431460 Carica papaya 330  
29785.m000935 B9SB42 PAC:16808481 Ricinus communis 353  
Cucsa.355160.1 PAC:16980184 Cucumis sativus 334  
ATCG00020.1 P83755 PAC:19637957 Arabidopsis thaliana 353  
Thhalv10028093m V4NKS1 PAC:20189951 Eutrema salsugineum 353  
Thhalv10012367m V4KTZ9 PAC:20185150 Eutrema salsugineum 321  
Lus10004895 K4KMB6 PAC:23178690 Linum usitatissimum 353  
Potri.013G138300.1 PAC:26993824 Populus trichocarpa 353  
Potri.013G143200.1 PAC:26995871 Populus trichocarpa 353  
Thecc1EG046369t1 PAC:27459544 Theobroma cacao 353  
Bradi1g05798.1.p PAC:31129348 Brachypodium distachyon 355  
Medtr4g051290.1 G7JG21 PAC:31108493 Medicago truncatula 353  
Medtr7g021750.1 A2Q5A0 PAC:31081680 Medicago truncatula 353  
Medtr0002s0380.1 A0A072TJH7 PAC:31084709 Medicago truncatula 353  
Sphfalx0000s0300.1.p PAC:32613909 Sphagnum fallax 336  
Seita.J017900.1.p K3Z2Q6 PAC:32706099 Setaria italica 353  
Bradi4g19720.1.p A0A2K2CNR4 PAC:32788109 Brachypodium distachyon 353  
Mapoly0093s0016.1.p A0A2R6WGG2 PAC:33025268 Marchantia polymorpha 330  
Aco024840.1 A0A0A8K8C8 PAC:33049856 Ananas comosus 353  
LOC_Os10g21192.1 PAC:33099820 Oryza sativa 353  
LOC_Os04g16770.1 PAC:33108522 Oryza sativa 353  
LOC_Os08g35420.1 PAC:33106537 Oryza sativa 353  
Brdisv1Per11036441m.p PAC:33243599 Brachypodium distachyon Per1 353  
Brdisv1Per11046497m.p B3TNB3 PAC:33248591 Brachypodium distachyon Per1 353  
Brdisv1Koz-11047082m.p B3TNB3 PAC:33388103 Brachypodium distachyon Koz-1 353  
Brdisv1Koz-11047012m.p PAC:33386789 Brachypodium distachyon Koz-1 275  
Brdisv1Koz-11047199m.p PAC:33387924 Brachypodium distachyon Koz-1 308  
Brdisv20Bd21Ref1038985m.p PAC:33451407 Brachypodium distachyon Bd21 AnntCtrl 353  
Brdisv1ABR9_r1035257m.p B3TNB3 PAC:33550375 Brachypodium distachyon ABR9 353  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12518057
            14871485
            15100025
            15308630
            10966643
            15123635